PDB entry 3qsu

View 3qsu on RCSB PDB site
Description: Structure of Staphylococcus aureus Hfq in complex with A7 RNA
Class: chaperone/RNA
Keywords: hexamer, Sm/Lsm family, RNA chaperone, translational regulator, mRNA, sRNA, cytoplasma, CHAPERONE-RNA complex
Deposited on 2011-02-21, released 2012-09-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-08, with a file datestamp of 2017-11-03.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsua_
  • Chain 'B':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsub_
  • Chain 'C':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsuc_
  • Chain 'D':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsud_
  • Chain 'E':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsue_
  • Chain 'F':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsuf_
  • Chain 'G':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsug_
  • Chain 'H':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsuh_
  • Chain 'I':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsui_
  • Chain 'J':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsuj_
  • Chain 'K':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsuk_
  • Chain 'M':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsum_
  • Chain 'N':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsun_
  • Chain 'P':
    Compound: RNA (5'-r(p*ap*ap*ap*ap*ap*ap*a)-3')
  • Chain 'R':
    Compound: RNA (5'-r(p*ap*ap*ap*ap*ap*ap*a)-3')
  • Chain 'S':
    Compound: RNA chaperone Hfq
    Species: Staphylococcus aureus [TaxId:889933]
    Gene: ECTR2_1161, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qsus_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3qsuA (A:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuA (A:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3qsuB (B:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuB (B:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv
e

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3qsuC (C:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuC (C:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3qsuD (D:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuD (D:)
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ve

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3qsuE (E:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuE (E:)
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v

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3qsuF (F:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuF (F:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3qsuG (G:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuG (G:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv
e

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3qsuH (H:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuH (H:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv
e

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >3qsuI (I:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuI (I:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >3qsuJ (J:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuJ (J:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv
e

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >3qsuK (K:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuK (K:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv
e

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >3qsuM (M:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuM (M:)
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v

  • Chain 'N':
    Sequence, based on SEQRES records: (download) 
    >3qsuN (N:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuN (N:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv
e

  • Chain 'P':
    No sequence available.

  • Chain 'R':
    No sequence available.

  • Chain 'S':
    Sequence, based on SEQRES records: (download) 
    >3qsuS (S:)
mianeniqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhai
stytvetegqastesee

    Sequence, based on observed residues (ATOM records): (download) 
    >3qsuS (S:)
niqdkalenfkanqtevtvfflngfqmkgvieeydkyvvslnsqgkqhliykhaistytv
e