PDB entry 3qq8

View 3qq8 on RCSB PDB site
Description: Crystal structure of p97-N in complex with FAF1-UBX
Class: transport protein/apoptosis
Keywords: beta-barrel, beta-grasp, ATPase, ubiquitin, phosphorylation, TRANSPORT PROTEIN-APOPTOSIS complex
Deposited on 2011-02-15, released 2011-06-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-06-22, with a file datestamp of 2011-06-17.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.169
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transitional endoplasmic reticulum ATPase
    Species: Homo sapiens [TaxId:9606]
    Gene: VCP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qq8a1, d3qq8a2
  • Chain 'B':
    Compound: fas-associated factor 1
    Species: Homo sapiens [TaxId:9606]
    Gene: FAF1, UBXD12, UBXN3A, CGI-03
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qq8b_
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3qq8A (A:)
asgadskgddlstailkqknrpnrlivdeainednsvvslsqpkmdelqlfrgdtvllkg
kkrreavcivlsddtcsdekirmnrvvrnnlrvrlgdvisiqpcpdvkygkrihvlpidd
tvegitgnlfevylkpyfleayrpirkgdiflvrggmravefkvvetdpspycivapdtv
ihcege

    Sequence, based on observed residues (ATOM records): (download) 
    >3qq8A (A:)
ddlstailkqknrpnrlivdeainednsvvslsqpkmdelqlfrgdtvllkgkkrreavc
ivlsddtcsdekirmnrvvrnnlrvrlgdvisiqpcpdvkygkrihvlpiddtvegitgn
lfevylkpyfleayrpirkgdiflvrggmravefkvvetdpspycivapdtvihceg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3qq8B (B:)
msenaepvsklrirtpsgeflerrflasnklqivfdfvaskgfpwdeykllstfprrdvt
qldpnksllevklfpqetlfleake

    Sequence, based on observed residues (ATOM records): (download) 
    >3qq8B (B:)
aepvsklrirtpsgeflerrflasnklqivfdfvaskgfpwdeykllstfprrdvtqldp
nksllevklfpqetlfleak