PDB entry 3qo2
View 3qo2 on RCSB PDB site
Description: Structural insights for MPP8 chromodomain interaction with histone H3 lysine 9
Class: DNA binding protein/gene regulation
Keywords: epigenetics, MPP8 phosphorylation, chromodomain, MPP8-H3K9me modulates the expression of E-cadherin, H3K9 methyl-lysine binding, tri-methyl-lysine, DNA BINDING PROTEIN-GENE REGULATION complex, Histone H3 tail Binding Protein
Deposited on
2011-02-09, released
2011-04-06
The last revision prior to the SCOPe 2.01 freeze date was dated
2011-04-06, with a file datestamp of
2011-04-01.
Experiment type: XRAY
Resolution: 2.49 Å
R-factor: 0.218
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: M-phase phosphoprotein 8
Species: Homo sapiens [TaxId:9606]
Gene: MPHOSPH8, MPP8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3qo2a_ - Chain 'B':
Compound: M-phase phosphoprotein 8
Species: Homo sapiens [TaxId:9606]
Gene: MPHOSPH8, MPP8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3qo2b_ - Chain 'C':
Compound: M-phase phosphoprotein 8
Species: Homo sapiens [TaxId:9606]
Gene: MPHOSPH8, MPP8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3qo2c_ - Chain 'D':
Compound: M-phase phosphoprotein 8
Species: Homo sapiens [TaxId:9606]
Gene: MPHOSPH8, MPP8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3qo2d_ - Chain 'P':
Compound: histone h3 peptide
Species: synthetic, synthetic [TaxId:32630]
Database cross-references and differences (RAF-indexed):
- Chain 'Q':
Compound: histone h3 peptide
Species: synthetic, synthetic [TaxId:32630]
Database cross-references and differences (RAF-indexed):
- Chain 'R':
Compound: histone h3 peptide
Species: synthetic, synthetic [TaxId:32630]
Database cross-references and differences (RAF-indexed):
- Chain 'S':
Compound: histone h3 peptide
Species: synthetic, synthetic [TaxId:32630]
Database cross-references and differences (RAF-indexed):
- Heterogens: EDO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3qo2A (A:)
hmgedvfevekildmkteggkvlykvrwkgytsdddtwepeihledckevllefrkkiae
nkak
Sequence, based on observed residues (ATOM records): (download)
>3qo2A (A:)
mgedvfevekildmkteggkvlykvrwkgytsdddtwepeihledckevllefrkkiaen
k
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3qo2B (B:)
hmgedvfevekildmkteggkvlykvrwkgytsdddtwepeihledckevllefrkkiae
nkak
Sequence, based on observed residues (ATOM records): (download)
>3qo2B (B:)
dvfevekildmkteggkvlykvrwkgytsdddtwepeihledckevllefrkkiaenka
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3qo2C (C:)
hmgedvfevekildmkteggkvlykvrwkgytsdddtwepeihledckevllefrkkiae
nkak
Sequence, based on observed residues (ATOM records): (download)
>3qo2C (C:)
edvfevekildmkteggkvlykvrwkgytsdddtwepeihledckevllefrkkiaenk
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3qo2D (D:)
hmgedvfevekildmkteggkvlykvrwkgytsdddtwepeihledckevllefrkkiae
nkak
Sequence, based on observed residues (ATOM records): (download)
>3qo2D (D:)
edvfevekildmkteggkvlykvrwkgytsdddtwepeihledckevllefrkkiaenk
- Chain 'P':
No sequence available.
- Chain 'Q':
No sequence available.
- Chain 'R':
No sequence available.
- Chain 'S':
No sequence available.