PDB entry 3qjf

View 3qjf on RCSB PDB site
Description: Crystal structure of the 2B4 TCR
Class: immune system
Keywords: immunoglobulin domain, T cell receptor, IMMUNE SYSTEM
Deposited on 2011-01-28, released 2011-04-27
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-08-10, with a file datestamp of 2011-08-05.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.212
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2B4 alpha chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJF
    Domains in SCOPe 2.07: d3qjfa1, d3qjfa2
  • Chain 'B':
    Compound: 2B4 beta chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJF
    Domains in SCOPe 2.07: d3qjfb1, d3qjfb2
  • Chain 'C':
    Compound: 2B4 alpha chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJF
    Domains in SCOPe 2.07: d3qjfc1, d3qjfc2
  • Chain 'D':
    Compound: 2B4 beta chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJF (Start-243)
    Domains in SCOPe 2.07: d3qjfd1, d3qjfd2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3qjfA (A:)
    mrgdqveqspsalslhegtgsalrcnftttmravqwfqqnsrgslinlfylasgtkengr
    lkstfnskesystlhirdaqledsgtyfcaalratggnnkltfgqgtvlsvipdiqnpdp
    avyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsn
    ksdfacanafnnsiipedtffpspess
    

    Sequence, based on observed residues (ATOM records): (download)
    >3qjfA (A:)
    qveqspsalslhegtgsalrcnftttmravqwfqqnsrgslinlfylasgtkengrlkst
    fnskesystlhirdaqledsgtyfcaalratnnkltfgqgtvlsvipdiqnpdpavyqlr
    dskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnfacana
    fnnsiipedtffpsp
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3qjfB (B:)
    mskviqtprylvkgqgqkakmrcipekghpvvfwyqqnknnefkflinfqnqevlqqidm
    tekrfsaecpsnspcsleiqsseagdsalylcasslnwsqdtqyfgpgtrllvledlknv
    fppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeq
    palndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeaw
    grad
    

    Sequence, based on observed residues (ATOM records): (download)
    >3qjfB (B:)
    skviqtprylvkgqgqkakmrcipekghpvvfwyqqnknnefkflinfqnqevlqqidmt
    ekrfsaecpsnspcsleiqsseagdsalylcasslsqdtqyfgpgtrllvledlknvfpp
    evavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpal
    ndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgra
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3qjfC (C:)
    mrgdqveqspsalslhegtgsalrcnftttmravqwfqqnsrgslinlfylasgtkengr
    lkstfnskesystlhirdaqledsgtyfcaalratggnnkltfgqgtvlsvipdiqnpdp
    avyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsn
    ksdfacanafnnsiipedtffpspess
    

    Sequence, based on observed residues (ATOM records): (download)
    >3qjfC (C:)
    dqveqspsalslhegtgsalrcnftttmravqwfqqnsrgslinlfylasgtkengrlks
    tfnskesystlhirdaqledsgtyfcaalratnnkltfgqgtvlsvipdiqnpdpavyql
    rdsksksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnkfacana
    fnnsiipedtffp
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3qjfD (D:)
    mskviqtprylvkgqgqkakmrcipekghpvvfwyqqnknnefkflinfqnqevlqqidm
    tekrfsaecpsnspcsleiqsseagdsalylcasslnwsqdtqyfgpgtrllvledlknv
    fppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeq
    palndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeaw
    grad
    

    Sequence, based on observed residues (ATOM records): (download)
    >3qjfD (D:)
    viqtprylvkgqgqkakmrcipekghpvvfwyqqnknnefkflinfqnqevlqqidmtek
    rfsaecpsnspcsleiqsseagdsalylcasslnqdtqyfgpgtrllvledlknvfppev
    avfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpalnd
    sryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgrad