PDB entry 3qeu
View 3qeu on RCSB PDB site
Description: The crystal structure of TCR DMF5
Class: immune system
Keywords: MART-1 peptide, nonapeptide, MHC class I, HLA-A2, TCR DMF5, TCR DMF4, cross-reactivity, cancer, melanoma, IMMUNE SYSTEM
Deposited on
2011-01-20, released
2011-07-06
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-09-07, with a file datestamp of
2011-09-02.
Experiment type: XRAY
Resolution: 2.09 Å
R-factor: 0.209
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DMF5 alpha chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3qeua1, d3qeua2 - Chain 'B':
Compound: DMF5 beta chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3qeub1, d3qeub2 - Chain 'D':
Compound: DMF5 alpha chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3qeud1, d3qeud2 - Chain 'E':
Compound: DMF5 beta chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3qeue1, d3qeue2 - Heterogens: LI, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3qeuA (A:)
akeveqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimfiysngdkedgr
ftaqlnkasqyvsllirdsqpsdsatylcavnfgggklifgqgtelsvkpniqnpdpavy
qlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksd
facanafnnsiipedtffpspe
Sequence, based on observed residues (ATOM records): (download)
>3qeuA (A:)
keveqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimfiysngdkedgrf
taqlnkasqyvsllirdsqpsdsatylcavnfgggklifgqgtelsvkpniqnpdpavyq
lrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawacanaf
nnsiipedtffpspe
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3qeuB (B:)
miagitqaptsqilaagrrmtlrctqdmrhnamywyrqdlglglrlihysntagttgkge
vpdgysvsrantddfpltlasavpsqtsvyfcasslsfgteaffgqgtrltvvedlnkvf
ppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqp
alndsryalssrlrvsatfwqdprnhfrcqvqfyglsendewtqdrakpvtqivsaeawg
rad
Sequence, based on observed residues (ATOM records): (download)
>3qeuB (B:)
iagitqaptsqilaagrrmtlrctqdmrhnamywyrqdlglglrlihysntagttgkgev
pdgysvsrantddfpltlasavpsqtsvyfcasslsfgteaffgqgtrltvvedlnkvfp
pevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpa
lndsryalssrlrvsatfwqdprnhfrcqvqfyglsendewtqdrakpvtqivsaeaw
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3qeuD (D:)
akeveqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimfiysngdkedgr
ftaqlnkasqyvsllirdsqpsdsatylcavnfgggklifgqgtelsvkpniqnpdpavy
qlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksd
facanafnnsiipedtffpspe
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>3qeuE (E:)
miagitqaptsqilaagrrmtlrctqdmrhnamywyrqdlglglrlihysntagttgkge
vpdgysvsrantddfpltlasavpsqtsvyfcasslsfgteaffgqgtrltvvedlnkvf
ppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqp
alndsryalssrlrvsatfwqdprnhfrcqvqfyglsendewtqdrakpvtqivsaeawg
rad