PDB entry 3qeu

View 3qeu on RCSB PDB site
Description: The crystal structure of TCR DMF5
Class: immune system
Keywords: MART-1 peptide, nonapeptide, MHC class I, HLA-A2, TCR DMF5, TCR DMF4, cross-reactivity, cancer, melanoma, IMMUNE SYSTEM
Deposited on 2011-01-20, released 2011-07-06
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-08, with a file datestamp of 2017-11-03.
Experiment type: XRAY
Resolution: 2.09 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DMF5 alpha chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3QEU (Start-201)
    Domains in SCOPe 2.07: d3qeua1, d3qeua2
  • Chain 'B':
    Compound: DMF5 beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3QEU
    Domains in SCOPe 2.07: d3qeub1, d3qeub2
  • Chain 'D':
    Compound: DMF5 alpha chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3QEU (0-201)
    Domains in SCOPe 2.07: d3qeud1, d3qeud2
  • Chain 'E':
    Compound: DMF5 beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3QEU (0-242)
    Domains in SCOPe 2.07: d3qeue1, d3qeue2
  • Heterogens: LI, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3qeuA (A:)
    akeveqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimfiysngdkedgr
    ftaqlnkasqyvsllirdsqpsdsatylcavnfgggklifgqgtelsvkpniqnpdpavy
    qlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksd
    facanafnnsiipedtffpspe
    

    Sequence, based on observed residues (ATOM records): (download)
    >3qeuA (A:)
    keveqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimfiysngdkedgrf
    taqlnkasqyvsllirdsqpsdsatylcavnfgggklifgqgtelsvkpniqnpdpavyq
    lrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawacanaf
    nnsiipedtffpspe
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3qeuB (B:)
    miagitqaptsqilaagrrmtlrctqdmrhnamywyrqdlglglrlihysntagttgkge
    vpdgysvsrantddfpltlasavpsqtsvyfcasslsfgteaffgqgtrltvvedlnkvf
    ppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqp
    alndsryalssrlrvsatfwqdprnhfrcqvqfyglsendewtqdrakpvtqivsaeawg
    rad
    

    Sequence, based on observed residues (ATOM records): (download)
    >3qeuB (B:)
    iagitqaptsqilaagrrmtlrctqdmrhnamywyrqdlglglrlihysntagttgkgev
    pdgysvsrantddfpltlasavpsqtsvyfcasslsfgteaffgqgtrltvvedlnkvfp
    pevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpa
    lndsryalssrlrvsatfwqdprnhfrcqvqfyglsendewtqdrakpvtqivsaeaw
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3qeuD (D:)
    akeveqnsgplsvpegaiaslnctysdrgsqsffwyrqysgkspelimfiysngdkedgr
    ftaqlnkasqyvsllirdsqpsdsatylcavnfgggklifgqgtelsvkpniqnpdpavy
    qlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksd
    facanafnnsiipedtffpspe
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3qeuE (E:)
    miagitqaptsqilaagrrmtlrctqdmrhnamywyrqdlglglrlihysntagttgkge
    vpdgysvsrantddfpltlasavpsqtsvyfcasslsfgteaffgqgtrltvvedlnkvf
    ppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqp
    alndsryalssrlrvsatfwqdprnhfrcqvqfyglsendewtqdrakpvtqivsaeawg
    rad