PDB entry 3pbf
View 3pbf on RCSB PDB site
Description: Surfactant Protein-A neck and carbohydrate recognition domain (NCRD) complexed with glycerol
Class: sugar binding protein
Keywords: collectin, carbohydrate binding, lectin, mannose, SUGAR BINDING PROTEIN
Deposited on
2010-10-20, released
2010-11-03
The last revision prior to the SCOPe 2.04 freeze date was dated
2012-08-01, with a file datestamp of
2012-07-27.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.207
AEROSPACI score: 0.5
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Pulmonary surfactant-associated protein A
Species: Rattus norvegicus [TaxId:10116]
Gene: Sftp-1, Sftp1, Sftpa, Sftpa1
Database cross-references and differences (RAF-indexed):
- Uniprot P08427 (Start-147)
- engineered mutation (106)
Domains in SCOPe 2.04: d3pbfa1, d3pbfa2 - Heterogens: CA, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3pbfA (A:)
ayldeelqtelyeikhqilqtmgvlslqgsmlsvgdkvfstngqsvnfdtikemctragg
niavprtpeeneaiasiakkynnyvylgmiedqtpgdfhyldgasvsytnwypgeprgqg
kekcvemytdgtwndrgclqyrlavcef
Sequence, based on observed residues (ATOM records): (download)
>3pbfA (A:)
deelqtelyeikhqilqtmgvlslqgsmlsvgdkvfstngqsvnfdtikemctraggnia
vprtpeeneaiasiakkynnyvylgmiedqtpgdfhyldgasvsytnwypgeprgqgkek
cvemytdgtwndrgclqyrlavcef