PDB entry 3p94

View 3p94 on RCSB PDB site
Description: Crystal structure of a GDSL-like Lipase (BDI_0976) from Parabacteroides distasonis ATCC 8503 at 1.93 A resolution
Class: hydrolase
Keywords: serine hydrolase, catalytic triad, gdsl-like lipase, flavodoxin-like, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-biology, hydrolase
Deposited on 2010-10-15, released 2010-11-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.93 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: GDSL-like Lipase
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0976
    Database cross-references and differences (RAF-indexed):
    • Uniprot A6LAN0 (1-203)
      • leader sequence (0)
    Domains in SCOPe 2.08: d3p94a1, d3p94a2
  • Chain 'B':
    Compound: GDSL-like Lipase
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0976
    Database cross-references and differences (RAF-indexed):
    • Uniprot A6LAN0 (1-203)
      • leader sequence (0)
    Domains in SCOPe 2.08: d3p94b1, d3p94b2
  • Chain 'C':
    Compound: GDSL-like Lipase
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0976
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3p94c_
  • Chain 'D':
    Compound: GDSL-like Lipase
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0976
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3p94d_
  • Heterogens: PG4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3p94A (A:)
gekgdwaqfgryaeanktvkvpsnvvfmgnsitdgwwpadstffirnnfvdrgisgqtts
emlvrfrqdvinlkpkavvilagindiahnngvialenvfgnlvsmaelakanhikvifc
svlpaydfpwrpgmqpadkviqlnkwikeyadkngltyvdyhsamkdernglpanlskdg
vhptlegykimekivleaihktvk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3p94B (B:)
gekgdwaqfgryaeanktvkvpsnvvfmgnsitdgwwpadstffirnnfvdrgisgqtts
emlvrfrqdvinlkpkavvilagindiahnngvialenvfgnlvsmaelakanhikvifc
svlpaydfpwrpgmqpadkviqlnkwikeyadkngltyvdyhsamkdernglpanlskdg
vhptlegykimekivleaihktvk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3p94C (C:)
gekgdwaqfgryaeanktvkvpsnvvfmgnsitdgwwpadstffirnnfvdrgisgqtts
emlvrfrqdvinlkpkavvilagindiahnngvialenvfgnlvsmaelakanhikvifc
svlpaydfpwrpgmqpadkviqlnkwikeyadkngltyvdyhsamkdernglpanlskdg
vhptlegykimekivleaihktvk

    Sequence, based on observed residues (ATOM records): (download) 
    >3p94C (C:)
gdwaqfgryaeanktvkvpsnvvfmgnsitdgwwpadstffirnnfvdrgisgqttseml
vrfrqdvinlkpkavvilagindiahnngvialenvfgnlvsmaelakanhikvifcsvl
paydfpwrpgmqpadkviqlnkwikeyadkngltyvdyhsamkdernglpanlskdgvhp
tlegykimekivleaihktv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3p94D (D:)
gekgdwaqfgryaeanktvkvpsnvvfmgnsitdgwwpadstffirnnfvdrgisgqtts
emlvrfrqdvinlkpkavvilagindiahnngvialenvfgnlvsmaelakanhikvifc
svlpaydfpwrpgmqpadkviqlnkwikeyadkngltyvdyhsamkdernglpanlskdg
vhptlegykimekivleaihktvk

    Sequence, based on observed residues (ATOM records): (download) 
    >3p94D (D:)
kgdwaqfgryaeanktvkvpsnvvfmgnsitdgwwpadstffirnnfvdrgisgqttsem
lvrfrqdvinlkpkavvilagindiahnngvialenvfgnlvsmaelakanhikvifcsv
lpaydfpwrpgmqpadkviqlnkwikeyadkngltyvdyhsamkdernglpanlskdgvh
ptlegykimekivleaihktv