PDB entry 3osf

View 3osf on RCSB PDB site
Description: The structure of protozoan parasite Trichomonas vaginalis Myb2 in complex with MRE-2f-13 DNA
Class: transcription/DNA
Keywords: transcription-DNA complex, Myb2, R2R3 Domain, DNA binding protein, transcription factor, Nucleus
Deposited on 2010-09-09, released 2011-08-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-08-28, with a file datestamp of 2013-08-23.
Experiment type: XRAY
Resolution: 2.03 Å
R-factor: 0.209
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: myb21
    Species: Trichomonas vaginalis [TaxId:5722]
    Gene: TVAG_211210
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3osfa1, d3osfa2
  • Chain 'B':
    Compound: 5'-d(*cp*tp*gp*tp*ap*tp*cp*gp*tp*cp*tp*tp*g)-3'
  • Chain 'C':
    Compound: 5'-d(*cp*ap*ap*gp*ap*cp*gp*ap*tp*ap*cp*ap*g)-3'
  • Chain 'D':
    Compound: myb21
    Species: Trichomonas vaginalis [TaxId:5722]
    Gene: TVAG_211210
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3osfd1, d3osfd2
  • Chain 'E':
    Compound: 5'-d(*cp*tp*gp*tp*ap*tp*cp*gp*tp*cp*tp*tp*g)-3'
  • Chain 'F':
    Compound: 5'-d(*cp*ap*ap*gp*ap*cp*gp*ap*tp*ap*cp*ap*g)-3'
  • Heterogens: IPA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3osfA (A:)
mvqvnlkaakkqkftpeedemlkravaqhgsdwkmiaatfpnrnarqcrdrwknylapsi
shtpwtaeedallvqkiqeygrqwaiiakffpgrtdihiknrwvtisnklgipqtqqmle
hhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3osfA (A:)
kkqkftpeedemlkravaqhgsdwkmiaatfpnrnarqcrdrwknylapsishtpwtaee
dallvqkiqeygrqwaiiakffpgrtdihiknrwvtisnklgi

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3osfD (D:)
mvqvnlkaakkqkftpeedemlkravaqhgsdwkmiaatfpnrnarqcrdrwknylapsi
shtpwtaeedallvqkiqeygrqwaiiakffpgrtdihiknrwvtisnklgipqtqqmle
hhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3osfD (D:)
kkqkftpeedemlkravaqhgsdwkmiaatfpnrnarqcrdrwknylapsishtpwtaee
dallvqkiqeygrqwaiiakffpgrtdihiknrwvtisnklgi

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.