PDB entry 3omz
View 3omz on RCSB PDB site
Description: Crystal structure of MICA-specific human gamma delta T cell receptor
Class: immune system
Keywords: Immunoglobulin fold, Immune surveillance of cell stress protein MIC-A/B, MIC-A/B binding, Epithelium, IMMUNE SYSTEM
Deposited on
2010-08-27, released
2011-01-26
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-02-23, with a file datestamp of
2011-02-18.
Experiment type: XRAY
Resolution: 3.04 Å
R-factor: 0.267
AEROSPACI score: 0.15
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: human Vdelta1 gamma delta T cell receptor delta1A/B-3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3omza1, d3omza2 - Chain 'C':
Compound: human Vdelta1 gamma delta T cell receptor delta1A/B-3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3omzc1, d3omzc2 - Chain 'E':
Compound: human Vdelta1 gamma delta T cell receptor delta1A/B-3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3omze1 - Chain 'G':
Compound: human Vdelta1 gamma delta T cell receptor delta1A/B-3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3omzA (A:)
mssnlegrtksvirqtgssaeitcdlaegstgyihwylhqegkapqrllyydsytssvvl
esgispgkydtygstrknlrmilrnliendsgvyycatwdqnyykklfgsgtslvvtdkq
gsaddakkdaakkdgaqkvtqaqssvsmpvrkavtlnclyetswwsyyifwykrlpskem
iflirqgsdeqnaksgrysvnfkkaaksvaltisalqledsakyfcalgesltradklif
gkgtrvtveprsqhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3omzA (A:)
svirqtgssaeitcdlgyihwylhqegkapqrllyydsytssvvlesgispgkydtygsk
nlrmilrnliendsgvyycatwdqnyykklfgsgtslvvtdqkvtqaqssvsmpvrkavt
lnclyetswwsyyifwykrlpskemiflirqgsdeqnaksgrysvnfkkaaksvaltisa
lqledsakyfcalgesltradklifgkgtrvtvep
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3omzC (C:)
mssnlegrtksvirqtgssaeitcdlaegstgyihwylhqegkapqrllyydsytssvvl
esgispgkydtygstrknlrmilrnliendsgvyycatwdqnyykklfgsgtslvvtdkq
gsaddakkdaakkdgaqkvtqaqssvsmpvrkavtlnclyetswwsyyifwykrlpskem
iflirqgsdeqnaksgrysvnfkkaaksvaltisalqledsakyfcalgesltradklif
gkgtrvtveprsqhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3omzC (C:)
svirqtgssaeitcdlgyihwylhqegkapqrllyydsytssvvlesgispgkydtnlrm
ilrnliendsgvyycatwdqnyykklfgsgtslvvtdqkvtqssvsmpvrkavtlnclye
tswwsyyifwykrlpskemiflirqgsdeqnaksgrysvnfkkaaksvaltisalqleds
akyfcalgesltradklifgkgtrvtvep
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3omzE (E:)
mssnlegrtksvirqtgssaeitcdlaegstgyihwylhqegkapqrllyydsytssvvl
esgispgkydtygstrknlrmilrnliendsgvyycatwdqnyykklfgsgtslvvtdkq
gsaddakkdaakkdgaqkvtqaqssvsmpvrkavtlnclyetswwsyyifwykrlpskem
iflirqgsdeqnaksgrysvnfkkaaksvaltisalqledsakyfcalgesltradklif
gkgtrvtveprsqhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3omzE (E:)
irqtgssaeitcdlgyihwylhkapqrllyydsytssvvlepgkydtnlrmilrnliend
sgvyycatwdqnyykklfgsgtslvvtqkvtqvvtlnclyetswwsyyifwykrlpskem
iflirqgsdeqnaksgrysvnfkkksvaltiskyfcalgesltradklifgk
- Chain 'G':
No sequence available.