PDB entry 3okn

View 3okn on RCSB PDB site
Description: Crystal structure of S25-39 in complex with Kdo(2.4)Kdo(2.4)Kdo
Class: immune system
Keywords: antibody, Fab, IgG, carbohydrate, IMMUNE SYSTEM
Deposited on 2010-08-25, released 2011-04-06
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-05-04, with a file datestamp of 2011-05-06.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.217
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: S25-39 Fab (IgG1k) light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3OKN (0-End)
    Domains in SCOPe 2.06: d3okna1, d3okna2
  • Chain 'B':
    Compound: S25-39 Fab (IgG1k) heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3OKN (0-221)
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3oknA (A:)
    divmtqspsslavsagekvtmnckssqsllnsrtrknylawyqqkpgqspklliywastr
    esgvpdrftgsgsgtdfaltissvqaedlavyyckqsynlrtfgggtkleikradaaptv
    sifppsseqltsggasvvcflnnfypkdinvkwkidgserangvlnswtdqdskdstysm
    tstltltkdeyerhnsytceashktstspivksfnrnec
    

    Sequence, based on observed residues (ATOM records): (download)
    >3oknA (A:)
    divmtqspsslavsagekvtmnckssqsllnsrtrknylawyqqkpgqspklliywastr
    esgvpdrftgsgsgtdfaltissvqaedlavyyckqsynlrtfgggtkleikradaaptv
    sifppsseqltsggasvvcflnnfypkdinvkwkidgserangvlnswtdqdskdstysm
    tstltltkdeyerhnsytceashktstspivksfnrne
    

  • Chain 'B':
    No sequence available.