PDB entry 3og9

View 3og9 on RCSB PDB site
Description: Structure of YahD with Malic acid
Class: hydrolase
Keywords: alpha/beta hydrolase, copper homeostasis, malic acid, HYDROLASE
Deposited on 2010-08-16, released 2010-12-15
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-06-19, with a file datestamp of 2013-06-14.
Experiment type: XRAY
Resolution: 1.88 Å
R-factor: 0.172
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein yahD a copper inducible hydrolase
    Species: Lactococcus lactis subsp. lactis [TaxId:272623]
    Gene: yahD, LL0076, L795, L79507
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9CJC1 (3-208)
      • see remark 999 (193)
      • see remark 999 (201)
    Domains in SCOPe 2.03: d3og9a_
  • Chain 'B':
    Compound: protein yahD a copper inducible hydrolase
    Species: Lactococcus lactis subsp. lactis [TaxId:272623]
    Gene: yahD, LL0076, L795, L79507
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9CJC1 (3-208)
      • see remark 999 (193)
      • see remark 999 (201)
    Domains in SCOPe 2.03: d3og9b_
  • Heterogens: MLT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3og9A (A:)
aghmtdyvfkagrkdlapllllhstggdehqlveiaemiapshpilsirgrineqgvnry
fklrglggftkenfdlesldeetdwltdevsllaekhdldvhkmiaigysnganvalnmf
lrgkinfdkiiafhgmqledfeqtvqlddkhvflsyapndmivpqknfgdlkgdledsgc
qleiyesslghqltqeevlaakkwltetk

    Sequence, based on observed residues (ATOM records): (download) 
    >3og9A (A:)
mtdyvfkagrkdlapllllhstggdehqlveiaemiapshpilsirgrineqgvnryfkl
rglggftkenfdlesldeetdwltdevsllaekhdldvhkmiaigysnganvalnmflrg
kinfdkiiafhgmqledfeqtvqlddkhvflsyapndmivpqknfgdlkgdledsgcqle
iyesslghqltqeevlaakkwltetk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3og9B (B:)
aghmtdyvfkagrkdlapllllhstggdehqlveiaemiapshpilsirgrineqgvnry
fklrglggftkenfdlesldeetdwltdevsllaekhdldvhkmiaigysnganvalnmf
lrgkinfdkiiafhgmqledfeqtvqlddkhvflsyapndmivpqknfgdlkgdledsgc
qleiyesslghqltqeevlaakkwltetk

    Sequence, based on observed residues (ATOM records): (download) 
    >3og9B (B:)
mtdyvfkagrkdlapllllhstggdehqlveiaemiapshpilsirgrineqgvnryfkl
rglggftkenfdlesldeetdwltdevsllaekhdldvhkmiaigysnganvalnmflrg
kinfdkiiafhgmqledfeqtvqlddkhvflsyapndmivpqknfgdlkgdledsgcqle
iyesslghqltqeevlaakkwltetk