PDB entry 3oed

View 3oed on RCSB PDB site
Description: The structure of the complex between complement receptor CR2 and its ligand complement fragment C3d
Class: immune system
Keywords: Complement Receptor, Complement fragment C3d, B Cell, IMMUNE SYSTEM
Deposited on 2010-08-12, released 2011-05-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-03-28, with a file datestamp of 2012-03-23.
Experiment type: XRAY
Resolution: 3.16 Å
R-factor: 0.189
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Complement C3
    Species: Homo sapiens [TaxId:9606]
    Gene: C3, CPAMD1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01024 (2-End)
      • expression tag (0-1)
      • engineered mutation (16)
    Domains in SCOPe 2.08: d3oeda1, d3oeda2
  • Chain 'B':
    Compound: Complement C3
    Species: Homo sapiens [TaxId:9606]
    Gene: C3, CPAMD1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01024 (2-End)
      • expression tag (0-1)
      • engineered mutation (16)
    Domains in SCOPe 2.08: d3oedb1, d3oedb2
  • Chain 'C':
    Compound: complement receptor type 2
    Species: Homo sapiens [TaxId:9606]
    Gene: C3DR, CR2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3oedc1, d3oedc2
  • Chain 'D':
    Compound: complement receptor type 2
    Species: Homo sapiens [TaxId:9606]
    Gene: C3DR, CR2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3oedd1, d3oedd2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3oedA (A:)
mldaerlkhlivtpsgageqnmigmtptviavhyldeteqwekfglekrqgalelikkgy
tqqlafrqpssafaafvkrapstwltayvvkvfslavnliaidsqvlcgavkwlilekqk
pdgvfqedapvihqemigglrnnnekdmaltafvlislqeakdiceeqvnslpgsitkag
dfleanymnlqrsytvaiagyalaqmgrlkgpllnkflttakdknrwedpgkqlynveat
syallallqlkdfdfvppvvrwlneqryygggygstqatfmvfqalaqyqkdapdhqeln
ldvslqlpsr

    Sequence, based on observed residues (ATOM records): (download) 
    >3oedA (A:)
mldaerlkhlivtpsgageqnmigmtptviavhyldeteqwekfglekrqgalelikkgy
tqqlafrqpssafaafvkrapstwltayvvkvfslavnliaidsqvlcgavkwlilekqk
pdgvfqedapvihqemigglrnnnekdmaltafvlislqeakdiceeqvnslpgsitkag
dfleanymnlqrsytvaiagyalaqmgrlkgpllnkflttakdknrwedpgkqlynveat
syallallqlkdfdfvppvvrwlneqryygggygstqatfmvfqalaqyqkdap

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3oedB (B:)
mldaerlkhlivtpsgageqnmigmtptviavhyldeteqwekfglekrqgalelikkgy
tqqlafrqpssafaafvkrapstwltayvvkvfslavnliaidsqvlcgavkwlilekqk
pdgvfqedapvihqemigglrnnnekdmaltafvlislqeakdiceeqvnslpgsitkag
dfleanymnlqrsytvaiagyalaqmgrlkgpllnkflttakdknrwedpgkqlynveat
syallallqlkdfdfvppvvrwlneqryygggygstqatfmvfqalaqyqkdapdhqeln
ldvslqlpsr

    Sequence, based on observed residues (ATOM records): (download) 
    >3oedB (B:)
mldaerlkhlivtpsgageqnmigmtptviavhyldeteqwekfglekrqgalelikkgy
tqqlafrqpssafaafvkrapstwltayvvkvfslavnliaidsqvlcgavkwlilekqk
pdgvfqedapvihqemigglrnnnekdmaltafvlislqeakdiceeqvnslpgsitkag
dfleanymnlqrsytvaiagyalaqmgrlkgpllnkflttakdknrwedpgkqlynveat
syallallqlkdfdfvppvvrwlneqryygggygstqatfmvfqalaqyqkdap

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3oedC (C:)
mgiscgspppilngrisyystpiavgtviryscsgtfrligeksllcitkdkvdgtwdkp
apkceyfnkysscpepivpggykirgstpyrhgdsvtfacktnfsmngnksvwcqannmw
gptrlptcvsvfple

    Sequence, based on observed residues (ATOM records): (download) 
    >3oedC (C:)
giscgspppilngrisyystpiavgtviryscsgtfrligeksllcitkdkvdgtwdkpa
pkceyfnkysscpepivpggykirgstpyrhgdsvtfacktnfsmngnksvwcqannmwg
ptrlptcvsv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3oedD (D:)
mgiscgspppilngrisyystpiavgtviryscsgtfrligeksllcitkdkvdgtwdkp
apkceyfnkysscpepivpggykirgstpyrhgdsvtfacktnfsmngnksvwcqannmw
gptrlptcvsvfple

    Sequence, based on observed residues (ATOM records): (download) 
    >3oedD (D:)
giscgspppilngrisyystpiavgtviryscsgtfrligeksllcitkdkvdgtwdkpa
pkceyfnkysscpepivpggykirgstpyrhgdsvtfacktnfsmngnksvwcqannmwg
ptrlptcvsv