PDB entry 3ndr
View 3ndr on RCSB PDB site
Description: Crystal structure of tetrameric pyridoxal 4-dehydrogenase from Mesorhizobium loti
Class: oxidoreductase
Keywords: PYRIDOXAL, tPLDH, 4-PYRIDOXOLACTONE, SHORT CHAIN DEHYDROGENASE/REDUCTASE, OXIDOREDUCTASE
Deposited on
2010-06-08, released
2011-06-08
The last revision prior to the SCOPe 2.04 freeze date was dated
2011-06-08, with a file datestamp of
2011-06-03.
Experiment type: XRAY
Resolution: 2.88 Å
R-factor: 0.188
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 3-oxoacyl-(acyl-carrier protein) reductase
Species: Mesorhizobium loti [TaxId:381]
Gene: mlr6807, pldh-t
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3ndra_ - Chain 'B':
Compound: 3-oxoacyl-(acyl-carrier protein) reductase
Species: Mesorhizobium loti [TaxId:381]
Gene: mlr6807, pldh-t
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3ndrb_ - Chain 'C':
Compound: 3-oxoacyl-(acyl-carrier protein) reductase
Species: Mesorhizobium loti [TaxId:381]
Gene: mlr6807, pldh-t
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3ndrc_ - Chain 'D':
Compound: 3-oxoacyl-(acyl-carrier protein) reductase
Species: Mesorhizobium loti [TaxId:381]
Gene: mlr6807, pldh-t
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3ndrd_ - Heterogens: NAD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3ndrA (A:)
terlagktalvtgaaqgigkaiaarlaadgatvivsdinaegakaaaasigkkaraiaad
isdpgsvkalfaeiqaltggidilvnnasivpfvawddvdldhwrkiidvnltgtfivtr
agtdqmraagkagrvisiasntffagtpnmaayvaakggvigftralatelgkynitana
vtpgliesdgvkasphneafgfvemlqamkgkgqpehiadvvsflasddarwitgqtlnv
dagmvrh
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3ndrB (B:)
terlagktalvtgaaqgigkaiaarlaadgatvivsdinaegakaaaasigkkaraiaad
isdpgsvkalfaeiqaltggidilvnnasivpfvawddvdldhwrkiidvnltgtfivtr
agtdqmraagkagrvisiasntffagtpnmaayvaakggvigftralatelgkynitana
vtpgliesdgvkasphneafgfvemlqamkgkgqpehiadvvsflasddarwitgqtlnv
dagmvrh
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3ndrC (C:)
terlagktalvtgaaqgigkaiaarlaadgatvivsdinaegakaaaasigkkaraiaad
isdpgsvkalfaeiqaltggidilvnnasivpfvawddvdldhwrkiidvnltgtfivtr
agtdqmraagkagrvisiasntffagtpnmaayvaakggvigftralatelgkynitana
vtpgliesdgvkasphneafgfvemlqamkgkgqpehiadvvsflasddarwitgqtlnv
dagmvrh
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3ndrD (D:)
terlagktalvtgaaqgigkaiaarlaadgatvivsdinaegakaaaasigkkaraiaad
isdpgsvkalfaeiqaltggidilvnnasivpfvawddvdldhwrkiidvnltgtfivtr
agtdqmraagkagrvisiasntffagtpnmaayvaakggvigftralatelgkynitana
vtpgliesdgvkasphneafgfvemlqamkgkgqpehiadvvsflasddarwitgqtlnv
dagmvrh