PDB entry 3n41

View 3n41 on RCSB PDB site
Description: Crystal structure of the mature envelope glycoprotein complex (spontaneous cleavage) of Chikungunya virus.
Class: viral protein
Keywords: viral protein, immature heterodimer, alphavirus, receptor binding, membrane fusion
Deposited on 2010-05-21, released 2010-12-01
The last revision prior to the SCOPe 2.06 freeze date was dated 2010-12-15, with a file datestamp of 2010-12-10.
Experiment type: XRAY
Resolution: 3.01 Å
R-factor: 0.253
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: E3 envelope glycoprotein
    Species: Chikungunya virus [TaxId:37124]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: e2 envelope glycoprotein
    Species: Chikungunya virus [TaxId:37124]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: e1 envelope glycoprotein
    Species: Chikungunya virus [TaxId:37124]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1H8W5 (22-402)
      • expression tag (21)
    Domains in SCOPe 2.06: d3n41f1, d3n41f2, d3n41f3
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3n41F (F:)
elyggggsggggsggggsggggyehvtvipntvgvpyktlvnrpgyspmvlemellsvtl
eptlsldyitceyktvipspyvkccgtaeckdknlpdysckvftgvypfmwggaycfcda
entqlseahveksescktefasayrahtasasaklrvlyqgnnitvtayangdhavtvkd
akfivgpmssawtpfdnkivvykgdvynmdyppfgagrpgqfgdiqsrtpeskdvyantq
lvlqrpaagtvhvpysqapsgfkywlkergaslqhtapfgcqiatnpvravncavgnmpi
sidipeaaftrvvdapsltdmscevpacthssdfggvaiikyaaskkgkcavhsmtnavt
ireaeievegnsqlqisfstalasaefrvqvcstqvhcaaechppkdhivnypashttlg
vqdisatamswvqkgpfeddddkagwshpqfekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records): (download) 
    >3n41F (F:)
gyehvtvipntvgvpyktlvnrpgyspmvlemellsvtleptlsldyitceyktvipspy
vkccgtaeckdknlpdysckvftgvypfmwggaycfcdaentqlseahveksescktefa
sayrahtasasaklrvlyqgnnitvtayangdhavtvkdakfivgpmssawtpfdnkivv
ykgdvynmdyppfgagrpgqfgdiqsrtpeskdvyantqlvlqrpaagtvhvpysqapsg
fkywlkergaslqhtapfgcqiatnpvravncavgnmpisidipeaaftrvvdapsltdm
scevpacthssdfggvaiikyaaskkgkcavhsmtnavtireaeievegnsqlqisfsta
lasaefrvqvcstqvhcaaech