PDB entry 3n1f
View 3n1f on RCSB PDB site
Description: Crystal Structure of IhhN bound to CDOFn3
Class: protein binding
Keywords: Binding Sites, Cell Adhesion Molecules, Cell Cycle Proteins, Cell Line, Conserved Sequence, Fibronectins, Hedgehog Proteins, Immunoglobulin G, Membrane Glycoproteins, Membrane Proteins, Protein Binding, Tertiary, Receptors, Cell Surface, Sequence Homology, Signal Transduction, Tumor Suppressor Proteins
Deposited on
2010-05-15, released
2010-06-02
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-06-19, with a file datestamp of
2013-06-14.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.155
AEROSPACI score: 0.64
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Indian hedgehog protein
Species: Homo sapiens [TaxId:9606]
Gene: IHH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3n1fa_ - Chain 'B':
Compound: Indian hedgehog protein
Species: Homo sapiens [TaxId:9606]
Gene: IHH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3n1fb_ - Chain 'C':
Compound: Cell adhesion molecule-related/down-regulated by oncogenes
Species: Homo sapiens [TaxId:9606]
Gene: CDON, CDO
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3n1fc_ - Chain 'D':
Compound: Cell adhesion molecule-related/down-regulated by oncogenes
Species: Homo sapiens [TaxId:9606]
Gene: CDON, CDO
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3n1fd1, d3n1fd2 - Heterogens: ZN, CA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3n1fA (A:)
gsgpgpgrvvgsrrrpprklvplaykqfspnvpektlgasgryegkiarsserfkeltpn
ynpdiifkdeentgadrlmtqrckdrlnslaisvmnqwpgvklrvtegwdedghhseesl
hyegravdittsdrdrnkygllarlaveagfdwvyyeskahvhcsvkse
Sequence, based on observed residues (ATOM records): (download)
>3n1fA (A:)
klvplaykqfspnvpektlgasgryegkiarsserfkeltpnynpdiifkdeentgadrl
mtqrckdrlnslaisvmnqwpgvklrvtegwdedghhseeslhyegravdittsdrdrnk
ygllarlaveagfdwvyyeskahvhcsvkse
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3n1fB (B:)
gsgpgpgrvvgsrrrpprklvplaykqfspnvpektlgasgryegkiarsserfkeltpn
ynpdiifkdeentgadrlmtqrckdrlnslaisvmnqwpgvklrvtegwdedghhseesl
hyegravdittsdrdrnkygllarlaveagfdwvyyeskahvhcsvkse
Sequence, based on observed residues (ATOM records): (download)
>3n1fB (B:)
lvplaykqfspnvpektlgasgryegkiarsserfkeltpnynpdiifkdeentgadrlm
tqrckdrlnslaisvmnqwpgvklrvtegwdedghhseeslhyegravdittsdrdrnky
gllarlaveagfdwvyyeskahvhcsvkse
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3n1fC (C:)
gstpitgphiayteavsdtqimlkwtyipssnnntpiqgfyiyyrptdsdndsdykrdvv
egskqwhmighlqpetsydikmqcfneggesefsnvmicetk
Sequence, based on observed residues (ATOM records): (download)
>3n1fC (C:)
pitgphiayteavsdtqimlkwtyiptpiqgfyiyyrptdsdndsdykrdvvegskqwhm
ighlqpetsydikmqcfneggesefsnvmicetk
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3n1fD (D:)
gstpitgphiayteavsdtqimlkwtyipssnnntpiqgfyiyyrptdsdndsdykrdvv
egskqwhmighlqpetsydikmqcfneggesefsnvmicetk