PDB entry 3msy

View 3msy on RCSB PDB site
Description: Crystal Structure of Mandelate racemase/muconate lactonizing enzyme from a Marine actinobacterium
Class: isomerase
Keywords: Enolase, Metal-binding, PSI-II, NYSGXRC., Structural Genomics, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, ISOMERASE
Deposited on 2010-04-29, released 2010-06-30
The last revision prior to the SCOPe 2.05 freeze date was dated 2010-06-30, with a file datestamp of 2010-06-25.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.238
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Mandelate racemase/muconate lactonizing enzyme
    Species: marine actinobacterium PHSC20C1 [TaxId:312284]
    Gene: A20C1_08358, AAOB01000002
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3msya1, d3msya2
  • Chain 'B':
    Compound: Mandelate racemase/muconate lactonizing enzyme
    Species: marine actinobacterium PHSC20C1 [TaxId:312284]
    Gene: A20C1_08358, AAOB01000002
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3msyb1, d3msyb2
  • Chain 'C':
    Compound: Mandelate racemase/muconate lactonizing enzyme
    Species: marine actinobacterium PHSC20C1 [TaxId:312284]
    Gene: A20C1_08358, AAOB01000002
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3msyc1, d3msyc2
  • Chain 'D':
    Compound: Mandelate racemase/muconate lactonizing enzyme
    Species: marine actinobacterium PHSC20C1 [TaxId:312284]
    Gene: A20C1_08358, AAOB01000002
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3msyd1, d3msyd2
  • Chain 'E':
    Compound: Mandelate racemase/muconate lactonizing enzyme
    Species: marine actinobacterium PHSC20C1 [TaxId:312284]
    Gene: A20C1_08358, AAOB01000002
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3msye1, d3msye2
  • Chain 'F':
    Compound: Mandelate racemase/muconate lactonizing enzyme
    Species: marine actinobacterium PHSC20C1 [TaxId:312284]
    Gene: A20C1_08358, AAOB01000002
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3msyf1, d3msyf2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3msyA (A:)
msltitrietipmvaplarefrgshyhmthrativtrvhtdagiigeaytgdehetmfdi
driiheelaptligqdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkal
kmplwklwggyrnelpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaa
ritaareaagddfiicidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvr
yqgsvpvcagqtefsasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmgh
heepqvsthllasqphgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnw
dyidqyrvskdeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3msyA (A:)
ipmvaplarefrgthrativtrvhtdagiigeaytgdehetmfdidriiheelaptligq
damaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkalkmplwklwggyrnel
pmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaaritaareaagddfii
cidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvryqgsvpvcagqtefs
asgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmghheepqvsthllasqp
hgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnwdyid

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3msyB (B:)
msltitrietipmvaplarefrgshyhmthrativtrvhtdagiigeaytgdehetmfdi
driiheelaptligqdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkal
kmplwklwggyrnelpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaa
ritaareaagddfiicidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvr
yqgsvpvcagqtefsasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmgh
heepqvsthllasqphgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnw
dyidqyrvskdeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3msyB (B:)
ipmvaplarefrgshthrativtrvhtdagiigeaytgdehetmfdidriiheelaptli
gqdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkalkmplwklwggyrn
elpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaaritaareaagddf
iicidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvryqgsvpvcagqte
fsasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmghheepqvsthllas
qphgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnwdyid

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3msyC (C:)
msltitrietipmvaplarefrgshyhmthrativtrvhtdagiigeaytgdehetmfdi
driiheelaptligqdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkal
kmplwklwggyrnelpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaa
ritaareaagddfiicidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvr
yqgsvpvcagqtefsasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmgh
heepqvsthllasqphgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnw
dyidqyrvskdeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3msyC (C:)
ipmvaplarefrgshthrativtrvhtdagiigeaytgdehetmfdidriiheelaptli
gqdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkalkmplwklwggyrn
elpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaaritaareaagddf
iicidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvryqgsvpvcagqte
fsasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmghheepqvsthllas
qphgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnwdyidqyrv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3msyD (D:)
msltitrietipmvaplarefrgshyhmthrativtrvhtdagiigeaytgdehetmfdi
driiheelaptligqdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkal
kmplwklwggyrnelpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaa
ritaareaagddfiicidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvr
yqgsvpvcagqtefsasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmgh
heepqvsthllasqphgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnw
dyidqyrvskdeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3msyD (D:)
ipmvaplarefrgshthrativtrvhtdagiigeaytgdehetmfdidriiheelaptli
gqdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkalkmplwklwggyrn
elpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaaritaareaagddf
iicidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvryqgsvpvcagqte
fsasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmghheepqvsthllas
qphgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnwdyid

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3msyE (E:)
msltitrietipmvaplarefrgshyhmthrativtrvhtdagiigeaytgdehetmfdi
driiheelaptligqdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkal
kmplwklwggyrnelpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaa
ritaareaagddfiicidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvr
yqgsvpvcagqtefsasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmgh
heepqvsthllasqphgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnw
dyidqyrvskdeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3msyE (E:)
ipmvaplarefrgsthrativtrvhtdagiigeaytgdehetmfdidriiheelaptlig
qdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkalkmplwklwggyrne
lpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaaritaareaagddfi
icidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvryqgsvpvcagqtef
sasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmghheepqvsthllasq
phgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnwdyid

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3msyF (F:)
msltitrietipmvaplarefrgshyhmthrativtrvhtdagiigeaytgdehetmfdi
driiheelaptligqdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkal
kmplwklwggyrnelpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaa
ritaareaagddfiicidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvr
yqgsvpvcagqtefsasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmgh
heepqvsthllasqphgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnw
dyidqyrvskdeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3msyF (F:)
ipmvaplarefrgshthrativtrvhtdagiigeaytgdehetmfdidriiheelaptli
gqdamaierlwdsgykvtfdilrdrrlglvalaavntaiwdavgkalkmplwklwggyrn
elpmiaiggyygeplgsiademhnyqelglagvkfkvgglsaaedaaritaareaagddf
iicidanqgykpavavdlsrriadlnirwfeepvewhndkrsmrdvryqgsvpvcagqte
fsasgcrdlmetgaidvcnfdsswsggptawlrtaaiatsydvqmghheepqvsthllas
qphgtiaecfhpdrdpfwwnmitnrpklnngtltlsdrpglgwdlnwdyid