PDB entry 3lp3

View 3lp3 on RCSB PDB site
Description: p15 HIV RNaseH domain with inhibitor MK3
Class: viral protein
Keywords: Reverse Transcriptase, RNase H, HIV, AIDS, Capsid maturation, DNA integration, DNA-directed DNA polymerase, Endonuclease, Host cytoplasm, Host nucleus, Multifunctional enzyme, RNA-binding, RNA-directed DNA polymerase, Viral nucleoprotein, Virion, VIRAL PROTEIN
Deposited on 2010-02-04, released 2010-06-09
The last revision prior to the SCOPe 2.05 freeze date was dated 2010-07-21, with a file datestamp of 2010-07-16.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.232
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: p15
    Species: Human immunodeficiency virus type 1 [TaxId:11676]
    Gene: gag-pol
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C6F2 (2-End)
      • insertion (1)
    Domains in SCOPe 2.05: d3lp3a_
  • Chain 'B':
    Compound: p15
    Species: Human immunodeficiency virus type 1 [TaxId:11676]
    Gene: gag-pol
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C6F2 (2-End)
      • insertion (1)
    Domains in SCOPe 2.05: d3lp3b_
  • Heterogens: MN, LP9, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3lp3A (A:)
gsyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiyl
alqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgigg
neqvdklvsagirkilfl

    Sequence, based on observed residues (ATOM records): (download) 
    >3lp3A (A:)
syqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiyla
lqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggn
eqvdklvsagi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3lp3B (B:)
gsyqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiyl
alqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgigg
neqvdklvsagirkilfl

    Sequence, based on observed residues (ATOM records): (download) 
    >3lp3B (B:)
syqlekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiyla
lqdsglevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggn
eqvdklvsagi