PDB entry 3lp2

View 3lp2 on RCSB PDB site
Description: HIV-1 reverse transcriptase with inhibitor
Class: transferase/hydrolase
Keywords: Reverse Transcriptase, RNase H, HIV, AIDS, Aspartyl protease, Capsid maturation, DNA integration, DNA-directed DNA polymerase, Endonuclease, Host cytoplasm, Host nucleus, Host-virus interaction, Hydrolase, Magnesium, Membrane, Metal-binding, Multifunctional enzyme, Nuclease, nucleotidyltransferase, Protease, RNA-binding, RNA-directed DNA polymerase, Transferase, Viral nucleoprotein, Virion, TRANSFERASE-HYDROLASE complex
Deposited on 2010-02-04, released 2010-06-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Reverse transcriptase/ribonuclease H
    Species: Human immunodeficiency virus type 1 [TaxId:11706]
    Gene: gag-pol
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04585 (3-End)
      • expression tag (2)
    Domains in SCOPe 2.08: d3lp2a1, d3lp2a2, d3lp2a3
  • Chain 'B':
    Compound: p51 RT
    Species: Human immunodeficiency virus type 1 [TaxId:11706]
    Gene: gag-pol
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3lp2b_
  • Heterogens: LP9, MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3lp2A (A:)
    mnspispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyn
    tpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkknksvtvldvgdayfs
    vpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpd
    iviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpd
    kwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplte
    eaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarm
    rgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefv
    ntpplvklwyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqkt
    elqaiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvp
    ahkgiggneqvdklvsagirkvl
    

    Sequence, based on observed residues (ATOM records): (download)
    >3lp2A (A:)
    spispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntp
    vfaiktkwrklvdfrelnkrtqdfwevqlgiphpaglkknksvtvldvgdayfsvplded
    frkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqy
    mddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqp
    ivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelel
    aenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtn
    dvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplv
    klwyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqaiy
    lalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgig
    gneqvdklvsagir
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3lp2B (B:)
    mnspispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyn
    tpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkknksvtvldvgdayfs
    vpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpd
    iviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpd
    kwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplte
    eaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarm
    rgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefv
    ntpplvklwyqlekepivgaetf
    

    Sequence, based on observed residues (ATOM records): (download)
    >3lp2B (B:)
    etvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfaikt
    kwrklvdfrelnkrtqdfwevqlgiphpaglkknksvtvldvgdayfsvpldedfrkyta
    ftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyv
    gsdleigqhrtkieelrqhllrwgltgyelhpdkwtvqpivlpekdswtvndiqklvgkl
    nwasqiypgikvrqlckllrgtkalteviplteeaelelaenreilkepvhgvyydpskd
    liaeiqkqgqgqwtyqiyqepfknlktgkyarhtndvkqlteavqkittesiviwgktpk
    fklpiqketwetwwteywqatwipewefvntpplvklwyq