PDB entry 3lhb

View 3lhb on RCSB PDB site
Description: the 2.7 angstrom crystal structure of deoxygenated hemoglobin from the sea lamprey (petromyzon marinus)
Class: metal binding protein
Keywords: hemoglobin, oxygen transport, bohr effect, metal binding protein
Deposited on 1999-01-12, released 1999-01-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.195
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhba_
  • Chain 'B':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbb_
  • Chain 'C':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbc_
  • Chain 'D':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbd_
  • Chain 'E':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbe_
  • Chain 'F':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbf_
  • Chain 'G':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbg_
  • Chain 'H':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbh_
  • Chain 'I':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbi_
  • Chain 'J':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbj_
  • Chain 'K':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbk_
  • Chain 'L':
    Compound: protein (hemoglobin)
    Species: Petromyzon marinus [TaxId:7757]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02208 (0-148)
      • conflict (62)
      • conflict (81)
      • conflict (99)
      • conflict (113)
    Domains in SCOPe 2.08: d3lhbl_
  • Heterogens: HEM

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbA (A:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbB (B:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbC (C:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbD (D:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbE (E:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbF (F:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbG (G:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbH (H:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbI (I:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbJ (J:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbK (K:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3lhbL (L:)
pivdtgsvaplsaaektkirsawapvystyetsgvdilvkfftstpaaqeffpkfkgltt
adelkksadvrwhaeriinavddavasmddtekmsmklrnlsgkhaksfqvdpeyfkvla
aviadtvaagdagfeklmsmicillrsay