PDB entry 3law
View 3law on RCSB PDB site
Description: Structure of GTP-bound L129F mutant Rab7
Class: proton transport
Keywords: Protein - Nucleotide complex, Protein Mutant, Charcot-Marie-Tooth disease, Cytoplasmic vesicle, Disease mutation, Endosome, GTP-binding, Lipoprotein, Lysosome, Methylation, Neuropathy, Nucleotide-binding, Phosphoprotein, Prenylation, Protein transport, PROTON TRANSPORT
Deposited on
2010-01-07, released
2010-01-26
The last revision prior to the SCOPe 2.01 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.237
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ras-related protein Rab-7a
Species: Homo sapiens [TaxId:9606]
Gene: RAB7A, RAB7
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3lawa_ - Chain 'B':
Compound: Ras-related protein Rab-7a
Species: Homo sapiens [TaxId:9606]
Gene: RAB7A, RAB7
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3lawb_ - Chain 'C':
Compound: Ras-related protein Rab-7a
Species: Homo sapiens [TaxId:9606]
Gene: RAB7A, RAB7
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3lawc_ - Chain 'D':
Compound: Ras-related protein Rab-7a
Species: Homo sapiens [TaxId:9606]
Gene: RAB7A, RAB7
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3lawd_ - Chain 'E':
Compound: Ras-related protein Rab-7a
Species: Homo sapiens [TaxId:9606]
Gene: RAB7A, RAB7
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3lawe_ - Heterogens: MG, GNP, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3lawA (A:)
mtsrkkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmq
iwdtagqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpf
vvlgnkidfenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
elynefpepikldkndrakasaescsc
Sequence, based on observed residues (ATOM records): (download)
>3lawA (A:)
kvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmqiwdta
gqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlgn
kidfenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetevel
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3lawB (B:)
mtsrkkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmq
iwdtagqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpf
vvlgnkidfenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
elynefpepikldkndrakasaescsc
Sequence, based on observed residues (ATOM records): (download)
>3lawB (B:)
kvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmqiwdta
gqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlgn
kidfenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3lawC (C:)
mtsrkkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmq
iwdtagqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpf
vvlgnkidfenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
elynefpepikldkndrakasaescsc
Sequence, based on observed residues (ATOM records): (download)
>3lawC (C:)
kkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmqiwdt
agqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlg
nkidfenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqeteve
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3lawD (D:)
mtsrkkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmq
iwdtagqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpf
vvlgnkidfenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
elynefpepikldkndrakasaescsc
Sequence, based on observed residues (ATOM records): (download)
>3lawD (D:)
kkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmqiwdt
agqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlg
nkidfenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3lawE (E:)
mtsrkkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmq
iwdtagqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpf
vvlgnkidfenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
elynefpepikldkndrakasaescsc
Sequence, based on observed residues (ATOM records): (download)
>3lawE (E:)
kvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmqiwdta
gqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlgn
kidfenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev