PDB entry 3l74

View 3l74 on RCSB PDB site
Description: Cytochrome BC1 complex from chicken with famoxadone bound
Class: oxidoreductase
Keywords: CYTOCHROME BC1, MEMBRANE PROTEIN, HEME PROTEIN, RIESKE IRON SULFUR PROTEIN, CYTOCHROME B, CYTOCHROME C1, COMPLEX III, MITOCHONDRIAL PROCESSING PROTEIN, UBIQUINONE, AZOXYSTROBIN OXIDOREDUCTASE, REDOX ENZYME RESPIRATORY CHAIN, ELECTRON TRANSPORT, HEME, INNER MEMBRANE, MEMBRANE, STROBILURINS BINDING, MITOCHONDRION, TRANSMEMBRANE, STIGMATELLIN, IRON, MITOCHONDRIAL INNER MEMBRANE, RESPIRATORY CHAIN, 2FE-2S, IRON-SULFUR, TRANSIT PEPTIDE, Metal-binding, Mitochondrion inner membrane, Transport, Disulfide bond
Deposited on 2009-12-28, released 2010-02-02
The last revision prior to the SCOPe 2.03 freeze date was dated 2010-02-02, with a file datestamp of 2010-01-29.
Experiment type: XRAY
Resolution: 2.76 Å
R-factor: 0.259
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Mitochondrial ubiquinol-cytochrome-c reductase complex core protein i
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX31
• Chain 'B':
  Compound: Mitochondrial ubiquinol-cytochrome-c reductase complex core protein 2
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX29 (Start-440)
• Chain 'C':
  Compound: cytochrome b
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P18946 (0-379)
  Domains in SCOPe 2.03: d3l74c1, d3l74c2
• Chain 'D':
  Compound: Mitochondrial cytochrome c1, heme protein
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX26 (0-240)
• Chain 'E':
  Compound: cytochrome b-c1 complex subunit 5, rieske ironsulfur protein, mitochondrial
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q5ZLR5 (0-195)
• Chain 'F':
  Compound: Mitochondrial ubiquinol-cytochrome c reductase 14 kda protein
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX30 (Start-109)
  Domains in SCOPe 2.03: d3l74f_
• Chain 'G':
  Compound: Mitochondrial ubiquinol-cytochrome c reductase ubiquinone-binding protein qp-c
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX32 (0-80)
  Domains in SCOPe 2.03: d3l74g_
• Chain 'H':
  Compound: Mitochondrial ubiquinol-cytochrome c reductase 11 kda protein, complex iii subunit viii
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX28 (Start-76)
  Domains in SCOPe 2.03: d3l74h_
• Chain 'I':
  Compound: Cytochrome b-c1 complex subunit Rieske, mitochondrial
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q5ZLR5 (15-End)
• Chain 'J':
  Compound: Mitochondrial ubiquinol-cytochrome c reductase 7.2 kda protein
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX27 (0-60)
  Domains in SCOPe 2.03: d3l74j_
• Chain 'N':
  Compound: Mitochondrial ubiquinol-cytochrome-c reductase complex core protein i
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX31
• Chain 'O':
  Compound: Mitochondrial ubiquinol-cytochrome-c reductase complex core protein 2
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX29 (Start-440)
• Chain 'P':
  Compound: cytochrome b
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P18946 (Start-379)
  Domains in SCOPe 2.03: d3l74p1, d3l74p2
• Chain 'Q':
  Compound: Mitochondrial cytochrome c1, heme protein
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX26 (0-240)
• Chain 'R':
  Compound: cytochrome b-c1 complex subunit 5, rieske ironsulfur protein, mitochondrial
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q5ZLR5 (0-195)
• Chain 'S':
  Compound: Mitochondrial ubiquinol-cytochrome c reductase 14 kda protein
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX30 (Start-109)
  Domains in SCOPe 2.03: d3l74s_
• Chain 'T':
  Compound: Mitochondrial ubiquinol-cytochrome c reductase ubiquinone-binding protein qp-c
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX32
  Domains in SCOPe 2.03: d3l74t_
• Chain 'U':
  Compound: Mitochondrial ubiquinol-cytochrome c reductase 11 kda protein, complex iii subunit viii
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX28 (Start-76)
  Domains in SCOPe 2.03: d3l74u_
• Chain 'V':
  Compound: Cytochrome b-c1 complex subunit Rieske, mitochondrial
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q5ZLR5 (15-End)
• Chain 'W':
  Compound: Mitochondrial ubiquinol-cytochrome c reductase 7.2 kda protein
  Species: Gallus gallus [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot D0VX27 (0-End)
  Domains in SCOPe 2.03: d3l74w_
• Heterogens: PEE, UNL, HEM, FMX, UQ, AZI, BOG, HEC, CDL, FES, HOH

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  No sequence available.
  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >3l74C (C:)
  mapnirkshpllkminnslidlpapsnisawwnfgsllavclmtqiltglllamhytadt
  slafssvahtcrnvqygwlirnlhangasffficiflhigrglyygsylyketwntgvil
  lltlmatafvgyvlpwgqmsfwgatvitnlfsaipyightlvewawggfsvdnptltrff
  alhfllpfaiagitiihltflhesgsnnplgissdsdkipfhpyysfkdilgltlmltpf
  ltlalfspnllgdpenftpanplvtpphikpewyflfayailrsipnklggvlalaasvl
  ilflipflhkskqrtmtfrplsqtlfwllvanlliltwigsqpvehpfiiigqmaslsyf
  tillilfptigtlenkmlny
  

  
  
• Chain 'D':
  No sequence available.
  
  
• Chain 'E':
  No sequence available.
  
  
• Chain 'F':
  Sequence, based on SEQRES records: (download)
  

  >3l74F (F:)
  aaratvagggrlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermf
  rikraldlslkhrilpkeqwvkyeedkpylepylkevirerlereawnkk
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3l74F (F:)
  grlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermfrikraldls
  lkhrilpkeqwvkyeedkpylepylkevirerlereawnkk
  

  
  
• Chain 'G':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >3l74G (G:)
  gihfgnlarvrhiityslspfeqraipnifsdalpnvwrrfssqvfkvappflgayllys
  wgtqeferlkrknpadyendq
  

  
  
• Chain 'H':
  Sequence, based on SEQRES records: (download)
  

  >3l74H (H:)
  lrgsgeeeeeelvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdf
  lhardhcvahklfnklk
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3l74H (H:)
  eeeelvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdflhardhc
  vahklfnklk
  

  
  
• Chain 'I':
  No sequence available.
  
  
• Chain 'J':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >3l74J (J:)
  allrqaysalfrrtstfaltvvlgavlferafdqgadaifehlnegklwkhikhkyease
  e
  

  
  
• Chain 'N':
  No sequence available.
  
  
• Chain 'O':
  No sequence available.
  
  
• Chain 'P':
  Sequence, based on SEQRES records: (download)
  

  >3l74P (P:)
  mapnirkshpllkminnslidlpapsnisawwnfgsllavclmtqiltglllamhytadt
  slafssvahtcrnvqygwlirnlhangasffficiflhigrglyygsylyketwntgvil
  lltlmatafvgyvlpwgqmsfwgatvitnlfsaipyightlvewawggfsvdnptltrff
  alhfllpfaiagitiihltflhesgsnnplgissdsdkipfhpyysfkdilgltlmltpf
  ltlalfspnllgdpenftpanplvtpphikpewyflfayailrsipnklggvlalaasvl
  ilflipflhkskqrtmtfrplsqtlfwllvanlliltwigsqpvehpfiiigqmaslsyf
  tillilfptigtlenkmlny
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3l74P (P:)
  apnirkshpllkminnslidlpapsnisawwnfgsllavclmtqiltglllamhytadts
  lafssvahtcrnvqygwlirnlhangasffficiflhigrglyygsylyketwntgvill
  ltlmatafvgyvlpwgqmsfwgatvitnlfsaipyightlvewawggfsvdnptltrffa
  lhfllpfaiagitiihltflhesgsnnplgissdsdkipfhpyysfkdilgltlmltpfl
  tlalfspnllgdpenftpanplvtpphikpewyflfayailrsipnklggvlalaasvli
  lflipflhkskqrtmtfrplsqtlfwllvanlliltwigsqpvehpfiiigqmaslsyft
  illilfptigtlenkmlny
  

  
  
• Chain 'Q':
  No sequence available.
  
  
• Chain 'R':
  No sequence available.
  
  
• Chain 'S':
  Sequence, based on SEQRES records: (download)
  

  >3l74S (S:)
  aaratvagggrlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermf
  rikraldlslkhrilpkeqwvkyeedkpylepylkevirerlereawnkk
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3l74S (S:)
  grlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermfrikraldls
  lkhrilpkeqwvkyeedkpylepylkevirerlereawnkk
  

  
  
• Chain 'T':
  Sequence, based on SEQRES records: (download)
  

  >3l74T (T:)
  gihfgnlarvrhiityslspfeqraipnifsdalpnvwrrfssqvfkvappflgayllys
  wgtqeferlkrknpadyendq
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3l74T (T:)
  ihfgnlarvrhiityslspfeqraipnifsdalpnvwrrfssqvfkvappflgayllysw
  gtqeferlkrknpadyen
  

  
  
• Chain 'U':
  Sequence, based on SEQRES records: (download)
  

  >3l74U (U:)
  lrgsgeeeeeelvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdf
  lhardhcvahklfnklk
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3l74U (U:)
  elvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdflhardhcvah
  klfnklk
  

  
  
• Chain 'V':
  No sequence available.
  
  
• Chain 'W':
  Sequence, based on SEQRES records: (download)
  

  >3l74W (W:)
  allrqaysalfrrtstfaltvvlgavlferafdqgadaifehlnegklwkhikhkyease
  e
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3l74W (W:)
  allrqaysalfrrtstfaltvvlgavlferafdqgadaifehlnegklwkhikhkyease