PDB entry 3l71

View 3l71 on RCSB PDB site
Description: Cytochrome BC1 complex from chicken with azoxystrobin bound
Class: oxidoreductase
Keywords: CYTOCHROME BC1, MEMBRANE PROTEIN, HEME PROTEIN, RIESKE IRON SULFUR PROTEIN, CYTOCHROME B, CYTOCHROME C1, COMPLEX III, MITOCHONDRIAL PROCESSING PROTEIN, UBIQUINONE, AZOXYSTROBIN OXIDOREDUCTASE, REDOX ENZYME RESPIRATORY CHAIN, ELECTRON TRANSPORT, HEME, INNER MEMBRANE, MEMBRANE, STROBILURINS BINDING, MITOCHONDRION, TRANSMEMBRANE, STIGMATELLIN, IRON, MITOCHONDRIAL INNER MEMBRANE, RESPIRATORY CHAIN, 2FE-2S, IRON-SULFUR, TRANSIT PEPTIDE, Metal-binding, Mitochondrion inner membrane, Transport, Disulfide bond
Deposited on 2009-12-27, released 2010-02-02
The last revision prior to the SCOPe 2.02 freeze date was dated 2010-02-02, with a file datestamp of 2010-01-29.
Experiment type: XRAY
Resolution: 2.84 Å
R-factor: 0.247
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Mitochondrial ubiquinol-cytochrome-c reductase complex core protein i
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Mitochondrial ubiquinol-cytochrome-c reductase complex core protein 2
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: cytochrome b
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Mitochondrial cytochrome c1, heme protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Cytochrome b-c1 complex subunit Rieske, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Mitochondrial ubiquinol-cytochrome c reductase 14 kda protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3l71f_
  • Chain 'G':
    Compound: Mitochondrial ubiquinol-cytochrome c reductase ubiquinone-binding protein qp-c
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3l71g_
  • Chain 'H':
    Compound: Mitochondrial ubiquinol-cytochrome c reductase 11 kda protein, complex iii subunit viii
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3l71h_
  • Chain 'I':
    Compound: Cytochrome b-c1 complex subunit Rieske, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5ZLR5 (15-End)
      • insertion (0-14)
  • Chain 'J':
    Compound: Mitochondrial ubiquinol-cytochrome c reductase 7.2 kda protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3l71j_
  • Chain 'N':
    Compound: Mitochondrial ubiquinol-cytochrome-c reductase complex core protein i
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'O':
    Compound: Mitochondrial ubiquinol-cytochrome-c reductase complex core protein 2
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: cytochrome b
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: Mitochondrial cytochrome c1, heme protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: Cytochrome b-c1 complex subunit Rieske, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'S':
    Compound: Mitochondrial ubiquinol-cytochrome c reductase 14 kda protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3l71s_
  • Chain 'T':
    Compound: Mitochondrial ubiquinol-cytochrome c reductase ubiquinone-binding protein qp-c
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3l71t_
  • Chain 'U':
    Compound: Mitochondrial ubiquinol-cytochrome c reductase 11 kda protein, complex iii subunit viii
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3l71u_
  • Chain 'V':
    Compound: Cytochrome b-c1 complex subunit Rieske, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5ZLR5 (15-End)
      • insertion (3-8)
      • insertion (9-14)
  • Chain 'W':
    Compound: Mitochondrial ubiquinol-cytochrome c reductase 7.2 kda protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3l71w_
  • Heterogens: PEE, HEM, AZO, UQ, GOL, HEC, CDL, BOG, FES, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3l71F (F:)
aaratvagggrlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermf
rikraldlslkhrilpkeqwvkyeedkpylepylkevirerlereawnkk

    Sequence, based on observed residues (ATOM records): (download) 
    >3l71F (F:)
grlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermfrikraldls
lkhrilpkeqwvkyeedkpylepylkevirerlereawnkk

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3l71G (G:)
gihfgnlarvrhiityslspfeqraipnifsdalpnvwrrfssqvfkvappflgayllys
wgtqeferlkrknpadyendq

    Sequence, based on observed residues (ATOM records): (download) 
    >3l71G (G:)
ihfgnlarvrhiityslspfeqraipnifsdalpnvwrrfssqvfkvappflgayllysw
gtqeferlkrknpadyendq

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3l71H (H:)
lrgsgeeeeeelvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdf
lhardhcvahklfnklk

    Sequence, based on observed residues (ATOM records): (download) 
    >3l71H (H:)
eeeelvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdflhardhc
vahklfnklk

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3l71J (J:)
allrqaysalfrrtstfaltvvlgavlferafdqgadaifehlnegklwkhikhkyease
e

  • Chain 'N':
    No sequence available.

  • Chain 'O':
    No sequence available.

  • Chain 'P':
    No sequence available.

  • Chain 'Q':
    No sequence available.

  • Chain 'R':
    No sequence available.

  • Chain 'S':
    Sequence, based on SEQRES records: (download) 
    >3l71S (S:)
aaratvagggrlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermf
rikraldlslkhrilpkeqwvkyeedkpylepylkevirerlereawnkk

    Sequence, based on observed residues (ATOM records): (download) 
    >3l71S (S:)
grlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermfrikraldls
lkhrilpkeqwvkyeedkpylepylkevirerlereawnkk

  • Chain 'T':
    Sequence, based on SEQRES records: (download) 
    >3l71T (T:)
gihfgnlarvrhiityslspfeqraipnifsdalpnvwrrfssqvfkvappflgayllys
wgtqeferlkrknpadyendq

    Sequence, based on observed residues (ATOM records): (download) 
    >3l71T (T:)
ihfgnlarvrhiityslspfeqraipnifsdalpnvwrrfssqvfkvappflgayllysw
gtqeferlkrknpadyend

  • Chain 'U':
    Sequence, based on SEQRES records: (download) 
    >3l71U (U:)
lrgsgeeeeeelvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdf
lhardhcvahklfnklk

    Sequence, based on observed residues (ATOM records): (download) 
    >3l71U (U:)
elvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdflhardhcvah
klfnklk

  • Chain 'V':
    No sequence available.

  • Chain 'W':
    Sequence, based on SEQRES records: (download) 
    >3l71W (W:)
allrqaysalfrrtstfaltvvlgavlferafdqgadaifehlnegklwkhikhkyease
e

    Sequence, based on observed residues (ATOM records): (download) 
    >3l71W (W:)
allrqaysalfrrtstfaltvvlgavlferafdqgadaifehlnegklwkhikhkyease