PDB entry 3l5w
View 3l5w on RCSB PDB site
Description: Crystal structure of the complex between IL-13 and C836 FAB
Class: immune system
Keywords: immunoglobulin fold, alpha-helical bundle, Cytokine, Disulfide bond, Glycoprotein, Polymorphism, Secreted, MONOCLONAL ANTIBODY, IMMUNE SYSTEM
Deposited on
2009-12-22, released
2010-04-14
The last revision prior to the SCOPe 2.06 freeze date was dated
2010-04-28, with a file datestamp of
2010-04-23.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.208
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: c836 light chain
Species: Mus musculus, Homo sapiens [TaxId:10090,9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3l5wa1, d3l5wa2 - Chain 'B':
Compound: c836 heavy chain
Species: Mus musculus, Homo sapiens [TaxId:10090,9606]
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: c836 heavy chain
Species: Mus musculus, Homo sapiens [TaxId:10090,9606]
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: interleukin-13
Species: Homo sapiens [TaxId:9606]
Gene: IL13, NC30
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3l5wi_ - Chain 'J':
Compound: interleukin-13
Species: Homo sapiens [TaxId:9606]
Gene: IL13, NC30
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3l5wj_ - Chain 'L':
Compound: c836 light chain
Species: Mus musculus, Homo sapiens [TaxId:10090,9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3l5wl1, d3l5wl2 - Heterogens: GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3l5wA (A:)
dvqitqspsylaaspgetitlncrasksiskylawyqekpgktnklliysgstlqsgips
rfsgsgsgtdftltisslepedfamyfcqqhneypytfgggtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>3l5wA (A:)
dvqitqspsylaaspgetitlncrasksiskylawyqekpgktnklliysgstlqsgips
rfsgsgsgtdftltisslepedfamyfcqqhneypytfgggtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge
- Chain 'B':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
Sequence, based on SEQRES records: (download)
>3l5wI (I:)
mgpvppstalrelieelvnitqnqkaplcngsmvwsinltagmycaaleslinvsgcsai
ektqrmlsgfcphkvsagqfsslhvrdtkievaqfvkdlllhlkklfregrfn
Sequence, based on observed residues (ATOM records): (download)
>3l5wI (I:)
stalrelieelvnitqaplcngsmvwsinltagmycaaleslinvsgcsaiektqrmlsg
fcphkvsagqfsslhvrdtkievaqfvkdlllhlkklfreg
- Chain 'J':
Sequence, based on SEQRES records: (download)
>3l5wJ (J:)
mgpvppstalrelieelvnitqnqkaplcngsmvwsinltagmycaaleslinvsgcsai
ektqrmlsgfcphkvsagqfsslhvrdtkievaqfvkdlllhlkklfregrfn
Sequence, based on observed residues (ATOM records): (download)
>3l5wJ (J:)
stalrelieelvnitqlcngsmvwsinltmycaaleslinvsgcsaiektqrmlsgfcph
kvsakievaqfvkdlllhlkklfreg
- Chain 'L':
Sequence, based on SEQRES records: (download)
>3l5wL (L:)
dvqitqspsylaaspgetitlncrasksiskylawyqekpgktnklliysgstlqsgips
rfsgsgsgtdftltisslepedfamyfcqqhneypytfgggtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>3l5wL (L:)
dvqitqspsylaaspgetitlncrasksiskylawyqekpgktnklliysgstlqsgips
rfsgsgsgtdftltisslepedfamyfcqqhneypytfgggtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge