PDB entry 3l2e

View 3l2e on RCSB PDB site
Description: Glycocyamine kinase, alpha-beta heterodimer from marine worm Namalycastis sp.
Class: transferase
Keywords: phosphagen kinase, glycocyamine kinase, Kinase, Transferase
Deposited on 2009-12-15, released 2010-03-02
The last revision prior to the SCOPe 2.03 freeze date was dated 2010-08-11, with a file datestamp of 2010-08-06.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.192
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glycocyamine kinase alpha chain
    Species: Namalycastis sp. ST01 [TaxId:243920]
    Gene: GK-alpha, GK_alpha
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3l2ea1, d3l2ea2
  • Chain 'B':
    Compound: Glycocyamine kinase beta chain
    Species: Namalycastis sp. ST01 [TaxId:243920]
    Gene: GK-beta, GK_beta
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3l2eb1
  • Chain 'C':
    Compound: Glycocyamine kinase alpha chain
    Species: Namalycastis sp. ST01 [TaxId:243920]
    Gene: GK-alpha, GK_alpha
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3l2ec1, d3l2ec2
  • Chain 'D':
    Compound: Glycocyamine kinase beta chain
    Species: Namalycastis sp. ST01 [TaxId:243920]
    Gene: GK-beta, GK_beta
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3l2ed1, d3l2ed2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3l2eA (A:)
mfkdytrekfakenfpdlskhnnvmasqltyelyekywdkvtpngvtfdkciqtgvdnpg
nkfygkktgcvfgdeysyecykeffdkcieeihhfkpsdkhpapdldhnklvggvfedky
vkscrircgrsvkgvclppamsraerrlvekvvsdalgglkgdlagkyyplttmnekdqe
qliedhflfekptgallttsgcardwpdgrgiwhnneknflvwineedhirvismqkggd
lkavfsrfarglleverlmkecghglmhndrlgyictcptnmgtvvrasvhlrlaflekh
prfdemlgklrlgkrgtggesslatdstydisnwarlgkserelvqvlvdgvnlliacdk
kleagqsiddmipk

    Sequence, based on observed residues (ATOM records): (download) 
    >3l2eA (A:)
fkdytrekfakenfpdlskhnnvmasqltyelyekywdkvtpngvtfdkciqtgvdnpgn
kfygkktgcvfgdeysyecykeffdkcieeihhfkpsdkhpapdldhnklvggvfedkyv
kscrircgrsvkgvclppamsraerrlvekvvsdalgglkgdlagkyyplttmnekdqeq
liedhflfekptgallttsgcardwpdgrgiwhnneknflvwineedhirvismqkggdl
kavfsrfarglleverlmkecghglmhndrlgyictcptnmgtvvrasvhlrlaflekhp
rfdemlgklrlgkrgtggesslatdstydisnwarlgkserelvqvlvdgvnlliacdkk
leagqsiddmipk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3l2eB (B:)
mgsaiqdyfvknrvghskpwesgkfkaadnfpdlskhnnvmasqltkelyekywdkvtpn
gvtfdkciqtgvdnpgnkfygkktgcvfgdeysyecykeffdkcieeihhfkpsdkhpap
dldhnklvggvfedkyvkscrircgrsvkgvclppamsraerrlvekvvsdalgglkgdl
agkyyplttmnekdqeqliedhflfekptgallttsgcardwpdgrgiwhnneknflvwi
needhirvismqkggdlkavfsrfarglleverlmkecghglmhndrlgyictcptnmgt
vvrasvhlrlaflekhprfdemlgklrlgkrgtggesslatdstydisnwarlgkserel
vqvlvdgvnlliacdkkleagqsiddmipk

    Sequence, based on observed residues (ATOM records): (download) 
    >3l2eB (B:)
gsaiqdyfvknrvghskpwesgkfkaadnfpdlskhnnvmasqltkelyekywdkvtpng
vtfdkciqtgvdnpgnkfygkktgcvfgdeysyecykeffdkcieeihhfkpsdkhpapd
ldhnklvggvfedkyvkscrircgrsvkgvclppamsraerrlvekvvsdalgglkgdla
gkyyplttmnekdqeqliedhflfekptgallttsgcardwpdgrgiwhnneknflvwin
eedhirvismqkggdlkavfsrfarglleverlmkecghglmhndrlgyictcptnmgtv
vrasvhlrlaflekhprfdemlgklrlgkrglatdstydisnwarlgkserelvqvlvdg
vnlliacdkkleagqsiddmipk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3l2eC (C:)
mfkdytrekfakenfpdlskhnnvmasqltyelyekywdkvtpngvtfdkciqtgvdnpg
nkfygkktgcvfgdeysyecykeffdkcieeihhfkpsdkhpapdldhnklvggvfedky
vkscrircgrsvkgvclppamsraerrlvekvvsdalgglkgdlagkyyplttmnekdqe
qliedhflfekptgallttsgcardwpdgrgiwhnneknflvwineedhirvismqkggd
lkavfsrfarglleverlmkecghglmhndrlgyictcptnmgtvvrasvhlrlaflekh
prfdemlgklrlgkrgtggesslatdstydisnwarlgkserelvqvlvdgvnlliacdk
kleagqsiddmipk

    Sequence, based on observed residues (ATOM records): (download) 
    >3l2eC (C:)
fkdytrekfakenfpdlskhnnvmasqltyelyekywdkvtpngvtfdkciqtgvdnpgn
kfygkktgcvfgdeysyecykeffdkcieeihhfkpsdkhpapdldhnklvggvfedkyv
kscrircgrsvkgvclppamsraerrlvekvvsdalgglkgdlagkyyplttmnekdqeq
liedhflfekptgallttsgcardwpdgrgiwhnneknflvwineedhirvismqkggdl
kavfsrfarglleverlmkecghglmhndrlgyictcptnmgtvvrasvhlrlaflekhp
rfdemlgklrlgkrgtggesslatdstydisnwarlgkserelvqvlvdgvnlliacdkk
leagqsiddmipk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3l2eD (D:)
mgsaiqdyfvknrvghskpwesgkfkaadnfpdlskhnnvmasqltkelyekywdkvtpn
gvtfdkciqtgvdnpgnkfygkktgcvfgdeysyecykeffdkcieeihhfkpsdkhpap
dldhnklvggvfedkyvkscrircgrsvkgvclppamsraerrlvekvvsdalgglkgdl
agkyyplttmnekdqeqliedhflfekptgallttsgcardwpdgrgiwhnneknflvwi
needhirvismqkggdlkavfsrfarglleverlmkecghglmhndrlgyictcptnmgt
vvrasvhlrlaflekhprfdemlgklrlgkrgtggesslatdstydisnwarlgkserel
vqvlvdgvnlliacdkkleagqsiddmipk

    Sequence, based on observed residues (ATOM records): (download) 
    >3l2eD (D:)
gsaiqdyfvknrvghskpwesgkfkaadnfpdlskhnnvmasqltkelyekywdkvtpng
vtfdkciqtgvdnpgnkfygkktgcvfgdeysyecykeffdkcieeihhfkpsdkhpapd
ldhnklvggvfedkyvkscrircgrsvkgvclppamsraerrlvekvvsdalgglkgdla
gkyyplttmnekdqeqliedhflfekptgallttsgcardwpdgrgiwhnneknflvwin
eedhirvismqkggdlkavfsrfarglleverlmkecghglmhndrlgyictcptnmgtv
vrasvhlrlaflekhprfdemlgklrlgkrtdstydisnwarlgkserelvqvlvdgvnl
liacdkkleagqsiddmipk