PDB entry 3ktg

View 3ktg on RCSB PDB site
Description: Structure of ClpP from Bacillus subtilis in monoclinic crystal form
Class: hydrolase
Keywords: hydrolase, ATP-binding, Nucleotide-binding, Protease, Serine protease, Stress response
Deposited on 2009-11-25, released 2010-03-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-11-03, with a file datestamp of 2010-10-29.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.212
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Bacillus subtilis [TaxId:1423]
    Gene: clpP, yvdN, BSU34540
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80244 (Start-195)
      • engineered (191)
      • engineered (193-195)
      • expression tag (196-197)
    Domains in SCOPe 2.08: d3ktga1, d3ktga2
  • Chain 'B':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Bacillus subtilis [TaxId:1423]
    Gene: clpP, yvdN, BSU34540
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80244 (Start-195)
      • engineered (191)
      • engineered (193-195)
      • expression tag (196-197)
    Domains in SCOPe 2.08: d3ktgb1, d3ktgb2
  • Chain 'C':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Bacillus subtilis [TaxId:1423]
    Gene: clpP, yvdN, BSU34540
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80244 (Start-195)
      • engineered (191)
      • engineered (193-195)
      • expression tag (196-197)
    Domains in SCOPe 2.08: d3ktgc1, d3ktgc2
  • Chain 'D':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Bacillus subtilis [TaxId:1423]
    Gene: clpP, yvdN, BSU34540
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80244 (Start-195)
      • engineered (191)
      • engineered (193-195)
      • expression tag (196-197)
    Domains in SCOPe 2.08: d3ktgd1, d3ktgd2
  • Chain 'E':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Bacillus subtilis [TaxId:1423]
    Gene: clpP, yvdN, BSU34540
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80244 (Start-195)
      • engineered (191)
      • engineered (193-195)
      • expression tag (196-197)
    Domains in SCOPe 2.08: d3ktge1, d3ktge2
  • Chain 'F':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Bacillus subtilis [TaxId:1423]
    Gene: clpP, yvdN, BSU34540
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80244 (Start-195)
      • engineered (191)
      • engineered (193-195)
      • expression tag (196-197)
    Domains in SCOPe 2.08: d3ktgf1, d3ktgf2
  • Chain 'G':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Bacillus subtilis [TaxId:1423]
    Gene: clpP, yvdN, BSU34540
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80244 (Start-195)
      • engineered (191)
      • engineered (193-195)
      • expression tag (196-197)
    Domains in SCOPe 2.08: d3ktgg1, d3ktgg2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3ktgA (A:)
    nliptvieqtnrgeraydiysrllkdriimlgsaiddnvansivsqllflaaedpekeis
    lyinspggsitagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevm
    ihqplggaqgqateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeeal
    eyglidkilthlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ktgA (A:)
    iptviaydiysrllkdriimlgsaiddnvansivsqllflaaedpekeislyinspggsi
    tagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevmihqplggaqg
    qateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeealeyglidkilt
    hlehhhhh
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3ktgB (B:)
    nliptvieqtnrgeraydiysrllkdriimlgsaiddnvansivsqllflaaedpekeis
    lyinspggsitagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevm
    ihqplggaqgqateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeeal
    eyglidkilthlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ktgB (B:)
    iptviaydiysrllkdriimlgsaiddnvansivsqllflaaedpekeislyinspggsi
    tagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevmihqplggaqg
    qateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeealeyglidkilt
    hlehhhhh
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3ktgC (C:)
    nliptvieqtnrgeraydiysrllkdriimlgsaiddnvansivsqllflaaedpekeis
    lyinspggsitagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevm
    ihqplggaqgqateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeeal
    eyglidkilthlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ktgC (C:)
    iptviaydiysrllkdriimlgsaiddnvansivsqllflaaedpekeislyinspggsi
    tagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevmihqplggaqg
    qateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeealeyglidkilt
    hlehhhhh
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3ktgD (D:)
    nliptvieqtnrgeraydiysrllkdriimlgsaiddnvansivsqllflaaedpekeis
    lyinspggsitagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevm
    ihqplggaqgqateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeeal
    eyglidkilthlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ktgD (D:)
    iptviaydiysrllkdriimlgsaiddnvansivsqllflaaedpekeislyinspggsi
    tagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevmihqplggaqg
    qateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeealeyglidkilt
    hlehhhhh
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >3ktgE (E:)
    nliptvieqtnrgeraydiysrllkdriimlgsaiddnvansivsqllflaaedpekeis
    lyinspggsitagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevm
    ihqplggaqgqateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeeal
    eyglidkilthlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ktgE (E:)
    iptviaydiysrllkdriimlgsaiddnvansivsqllflaaedpekeislyinspggsi
    tagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevmihqplggaqg
    qateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeealeyglidkilt
    hlehhhhh
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >3ktgF (F:)
    nliptvieqtnrgeraydiysrllkdriimlgsaiddnvansivsqllflaaedpekeis
    lyinspggsitagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevm
    ihqplggaqgqateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeeal
    eyglidkilthlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ktgF (F:)
    iptviaydiysrllkdriimlgsaiddnvansivsqllflaaedpekeislyinspggsi
    tagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevmihqplggaqg
    qateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeealeyglidkilt
    hlehhhhh
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >3ktgG (G:)
    nliptvieqtnrgeraydiysrllkdriimlgsaiddnvansivsqllflaaedpekeis
    lyinspggsitagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevm
    ihqplggaqgqateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeeal
    eyglidkilthlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ktgG (G:)
    iptviaydiysrllkdriimlgsaiddnvansivsqllflaaedpekeislyinspggsi
    tagmaiydtmqfikpkvsticigmaasmgafllaagekgkryalpnsevmihqplggaqg
    qateieiaakrilllrdklnkvlaertgqplevierdtdrdnfksaeealeyglidkilt
    hlehhhhh