PDB entry 3ksm

View 3ksm on RCSB PDB site
Description: Crystal structure of ABC-type sugar transport system, periplasmic component from Hahella chejuensis
Class: transport protein
Keywords: ABC-type sugar transport system, periplasmic component, PSI-II, 11023l, Structural Genomics, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, TRANSPORT PROTEIN
Deposited on 2009-11-23, released 2009-12-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ABC-type sugar transport system, periplasmic component
    Species: Hahella chejuensis [TaxId:349521]
    Gene: HCH_06819
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2S7D2 (0-274)
      • expression tag (275)
    Domains in SCOPe 2.08: d3ksma1, d3ksma2
  • Chain 'B':
    Compound: ABC-type sugar transport system, periplasmic component
    Species: Hahella chejuensis [TaxId:349521]
    Gene: HCH_06819
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2S7D2 (Start-274)
      • expression tag (275)
    Domains in SCOPe 2.08: d3ksmb1, d3ksmb2
  • Heterogens: BDR, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3ksmA (A:)
pklllvlkgdsnaywrqvylgaqkaadeagvtllhrstkddgdiagqiqilsyhlsqapp
dalilapnsaedltpsvaqyrarnipvlvvdsdlagdahqglvatdnyaagqlaaralla
tldlskerniallrlragnastdqreqgfldvlrkhdkiriiaapyagddrgaarsemlr
llketptidglftpnesttigalvairqsgmskqfgfigfdqteeleaamyageisnlvv
qnpeymgylavqraldlvrgkpipaftdtgvrllqe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ksmB (B:)
pklllvlkgdsnaywrqvylgaqkaadeagvtllhrstkddgdiagqiqilsyhlsqapp
dalilapnsaedltpsvaqyrarnipvlvvdsdlagdahqglvatdnyaagqlaaralla
tldlskerniallrlragnastdqreqgfldvlrkhdkiriiaapyagddrgaarsemlr
llketptidglftpnesttigalvairqsgmskqfgfigfdqteeleaamyageisnlvv
qnpeymgylavqraldlvrgkpipaftdtgvrllqe

    Sequence, based on observed residues (ATOM records): (download) 
    >3ksmB (B:)
klllvlkgdsnaywrqvylgaqkaadeagvtllhrstkddgdiagqiqilsyhlsqapda
lilapnsaedltpsvaqyrarnipvlvvdsdlagdahqglvatdnyaagqlaarallatl
dlskerniallrlragnastdqreqgfldvlrkhdkiriiaapyagddrgaarsemlrll
ketptidglftpnesttigalvairqsgmskqfgfigfdqteeleaamyageisnlvvqn
peymgylavqraldlvrgkpipaftdtgvrllqe