PDB entry 3kjk

View 3kjk on RCSB PDB site
Description: Crystal structure of NMB1025, a member of YjgF protein family, from Neisseria meningitidis (monoclinic crystal form)
Class: unknown function
Keywords: NMB1025, YjgF protein family, Neisseria meningitidis, OPPF, Structural Genomics, Oxford Protein Production Facility, UNKNOWN FUNCTION
Deposited on 2009-11-03, released 2009-11-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.29 Å
R-factor: 0.223
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjka_
  • Chain 'B':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjkb_
  • Chain 'C':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjkc_
  • Chain 'D':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjkd_
  • Chain 'E':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjke_
  • Chain 'F':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjkf_
  • Chain 'G':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjkg_
  • Chain 'H':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjkh_
  • Chain 'I':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjki_
  • Chain 'J':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjkj_
  • Chain 'K':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjkk_
  • Chain 'L':
    Compound: NMB1025 protein
    Species: Neisseria meningitidis serogroup B [TaxId:491]
    Gene: NMB1025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kjkl_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3kjkA (A:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkA (A:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3kjkB (B:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkB (B:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrd

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3kjkC (C:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkC (C:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrd

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3kjkD (D:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkD (D:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrda

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3kjkE (E:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkE (E:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrd

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3kjkF (F:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkF (F:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrd

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3kjkG (G:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkG (G:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrd

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3kjkH (H:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkH (H:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrd

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >3kjkI (I:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkI (I:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrd

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >3kjkJ (J:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkJ (J:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrd

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >3kjkK (K:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkK (K:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrd

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >3kjkL (L:)
mahhhhhhmdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlae
cgsdkahvldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikita
vkrdaata

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjkL (L:)
mdiryfgttpryseavgangliflsgmvpengetaaeqtadvlaqidrwlaecgsdkahv
ldaviylrdmgdyaemngvwdawvaagrtparacvearlarpewrveikitavkrda