PDB entry 3jsv

View 3jsv on RCSB PDB site
Description: Crystal structure of mouse NEMO CoZi in complex with Lys63-linked di-ubiquitin
Class: signaling protein/transcription
Keywords: ubiquitin, coiled-coil, cellular signaling, Cytoplasm, Isopeptide bond, Nucleus, Phosphoprotein, Ubl conjugation, Coiled coil, Disulfide bond, Metal-binding, Transcription, Transcription regulation, Zinc, Zinc-finger, SIGNALING PROTEIN/TRANSCRIPTION COMPLEX
Deposited on 2009-09-11, released 2009-10-27
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-10-27, with a file datestamp of 2009-10-23.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.25
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P62988 (0-75)
      • engineered (62)
    Domains in SCOPe 2.06: d3jsva_
  • Chain 'B':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P62988 (0-75)
      • engineered (76)
    Domains in SCOPe 2.06: d3jsvb_
  • Chain 'C':
    Compound: NF-kappa-B essential modulator
    Species: Mus musculus [TaxId:10090]
    Gene: Ikbkg, Nemo, NEMO(249-343)
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: NF-kappa-B essential modulator
    Species: Mus musculus [TaxId:10090]
    Gene: Ikbkg, Nemo, NEMO(249-343)
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3jsvA (A:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqrestlhlvlrlrgg
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3jsvB (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrggd
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.