PDB entry 3jsl

View 3jsl on RCSB PDB site
Description: Crystal structure of the adenylation domain of NAD+-dependent DNA ligase from Staphylococcus aureus
Class: ligase
Keywords: DNA ligase, NAD+-dependent, Staphylococcus aureus, DNA damage, DNA repair, DNA replication, Ligase, Magnesium, Manganese, Metal-binding, NAD, Zinc
Deposited on 2009-09-10, released 2009-12-15
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-12-15, with a file datestamp of 2009-12-11.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.198
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA ligase
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: ligA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3jsla_
  • Chain 'B':
    Compound: DNA ligase
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: ligA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3jslb_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3jslA (A:)
    madlssrvnelhdllnqysyeyyvednpsvpdseydkllhelikieeehpeyktvdsptv
    rvggeaqasfnkvnhdtpmlslgnafneddlrkfdqrireqignveymcelkidglavsl
    kyvdgyfvqgltrgdgttgeditenlktihaiplkmkeplnvevrgeaymprrsflrlne
    ekekndeqlfanprnaaagslrqldskltakrklsvfiysvndftdfnarsqsealdeld
    klgfttnknrarvnnidgvleyiekwtsqreslpydidgivikvndldqqdemgftqksp
    rwaiaykfpaeehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3jslA (A:)
    adlssrvnelhdllnqysyeyyvednpsvpdseydkllhelikieeehpeyktvdsptvr
    vggeaqasfnkvnhdtpmlslgnafneddlrkfdqrireqignveymcelkidglavslk
    yvdgyfvqgltrgdgttgeditenlktihaiplkmkeplnvevrgeaymprrsflrlnee
    kekndeqlfanprnaaagslrqldskltakrklsvfiysvndftdfnarsqsealdeldk
    lgfttnknrarvnnidgvleyiekwtsqreslpydidgivikvndldqqdemgftqkspr
    waiaykfp
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3jslB (B:)
    madlssrvnelhdllnqysyeyyvednpsvpdseydkllhelikieeehpeyktvdsptv
    rvggeaqasfnkvnhdtpmlslgnafneddlrkfdqrireqignveymcelkidglavsl
    kyvdgyfvqgltrgdgttgeditenlktihaiplkmkeplnvevrgeaymprrsflrlne
    ekekndeqlfanprnaaagslrqldskltakrklsvfiysvndftdfnarsqsealdeld
    klgfttnknrarvnnidgvleyiekwtsqreslpydidgivikvndldqqdemgftqksp
    rwaiaykfpaeehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3jslB (B:)
    adlssrvnelhdllnqysyeyyvednpsvpdseydkllhelikieeehpeyktvdsptvr
    vggeaqasfnkvnhdtpmlslgnafneddlrkfdqrireqignveymcelkidglavslk
    yvdgyfvqgltrgdgttgeditenlktihaiplkmkeplnvevrgeaymprrsflrlnee
    kekndeqlfanprnaaagslrqldskltakrklsvfiysvndftdfnarsqsealdeldk
    lgfttnknrarvnnidgvleyiekwtsqreslpydidgivikvndldqqdemgftqkspr
    waiaykfp