PDB entry 3js4

View 3js4 on RCSB PDB site
Description: Crystal structure of iron superoxide dismutase from Anaplasma phagocytophilum
Class: oxidoreductase
Keywords: NIAID, SSGCID, Seattle Structural Genomics Center for Infectious Disease, gram-negative bacteria, human granulocytic anaplasmosis, Fe, metalloenzyme, Oxidoreductase
Deposited on 2009-09-09, released 2009-09-22
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.169
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: superoxide dismutase
    Species: Anaplasma phagocytophilum [TaxId:212042]
    Gene: sodB, APH_0371
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2GKX4 (21-226)
      • expression tag (20)
    Domains in SCOPe 2.05: d3js4a1, d3js4a2
  • Chain 'B':
    Compound: superoxide dismutase
    Species: Anaplasma phagocytophilum [TaxId:212042]
    Gene: sodB, APH_0371
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2GKX4 (21-226)
      • expression tag (20)
    Domains in SCOPe 2.05: d3js4b1, d3js4b2
  • Chain 'C':
    Compound: superoxide dismutase
    Species: Anaplasma phagocytophilum [TaxId:212042]
    Gene: sodB, APH_0371
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3js4c1, d3js4c2
  • Chain 'D':
    Compound: superoxide dismutase
    Species: Anaplasma phagocytophilum [TaxId:212042]
    Gene: sodB, APH_0371
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3js4d1, d3js4d2
  • Heterogens: FE, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3js4A (A:)
mahhhhhhmgtleaqtqgpgsmfelsdlpyeglepyisshlldrhynghhktyvdvlnkl
vvgtefeglgneslgdivvkahnsgsagraifnnaaqiwnhdfywqsmkpngggnppekl
remiehsfgsvegfnnafttsglgqfgsgwvwlvydedakalkvvstanadsplltqgql
platmdvwehayyldylnlrkkyidvflehllnwdfvlgrledagvl

    Sequence, based on observed residues (ATOM records): (download) 
    >3js4A (A:)
smfelsdlpyeglepyisshlldrhynghhktyvdvlnklvvgtefeglgneslgdivvk
ahnsgsagraifnnaaqiwnhdfywqsmkpngggnppeklremiehsfgsvegfnnaftt
sglgqfgsgwvwlvydedakalkvvstanadsplltqgqlplatmdvwehayyldylnlr
kkyidvflehllnwdfvlgrledagvl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3js4B (B:)
mahhhhhhmgtleaqtqgpgsmfelsdlpyeglepyisshlldrhynghhktyvdvlnkl
vvgtefeglgneslgdivvkahnsgsagraifnnaaqiwnhdfywqsmkpngggnppekl
remiehsfgsvegfnnafttsglgqfgsgwvwlvydedakalkvvstanadsplltqgql
platmdvwehayyldylnlrkkyidvflehllnwdfvlgrledagvl

    Sequence, based on observed residues (ATOM records): (download) 
    >3js4B (B:)
smfelsdlpyeglepyisshlldrhynghhktyvdvlnklvvgtefeglgneslgdivvk
ahnsgsagraifnnaaqiwnhdfywqsmkpngggnppeklremiehsfgsvegfnnaftt
sglgqfgsgwvwlvydedakalkvvstanadsplltqgqlplatmdvwehayyldylnlr
kkyidvflehllnwdfvlgrledagvl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3js4C (C:)
mahhhhhhmgtleaqtqgpgsmfelsdlpyeglepyisshlldrhynghhktyvdvlnkl
vvgtefeglgneslgdivvkahnsgsagraifnnaaqiwnhdfywqsmkpngggnppekl
remiehsfgsvegfnnafttsglgqfgsgwvwlvydedakalkvvstanadsplltqgql
platmdvwehayyldylnlrkkyidvflehllnwdfvlgrledagvl

    Sequence, based on observed residues (ATOM records): (download) 
    >3js4C (C:)
mfelsdlpyeglepyisshlldrhynghhktyvdvlnklvvgtefeglgneslgdivvka
hnsgsagraifnnaaqiwnhdfywqsmkpngggnppeklremiehsfgsvegfnnaftts
glgqfgsgwvwlvydedakalkvvstanadsplltqgqlplatmdvwehayyldylnlrk
kyidvflehllnwdfvlgrledagvl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3js4D (D:)
mahhhhhhmgtleaqtqgpgsmfelsdlpyeglepyisshlldrhynghhktyvdvlnkl
vvgtefeglgneslgdivvkahnsgsagraifnnaaqiwnhdfywqsmkpngggnppekl
remiehsfgsvegfnnafttsglgqfgsgwvwlvydedakalkvvstanadsplltqgql
platmdvwehayyldylnlrkkyidvflehllnwdfvlgrledagvl

    Sequence, based on observed residues (ATOM records): (download) 
    >3js4D (D:)
mfelsdlpyeglepyisshlldrhynghhktyvdvlnklvvgtefeglgneslgdivvka
hnsgsagraifnnaaqiwnhdfywqsmkpngggnppeklremiehsfgsvegfnnaftts
glgqfgsgwvwlvydedakalkvvstanadsplltqgqlplatmdvwehayyldylnlrk
kyidvflehllnwdfvlgrledagvl