PDB entry 3js4
View 3js4 on RCSB PDB site
Description: Crystal structure of iron superoxide dismutase from Anaplasma phagocytophilum
Class: oxidoreductase
Keywords: NIAID, SSGCID, Seattle Structural Genomics Center for Infectious Disease, gram-negative bacteria, human granulocytic anaplasmosis, Fe, metalloenzyme, Oxidoreductase
Deposited on
2009-09-09, released
2009-09-22
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.169
AEROSPACI score: 0.49
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: superoxide dismutase
Species: Anaplasma phagocytophilum [TaxId:212042]
Gene: sodB, APH_0371
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3js4a1, d3js4a2 - Chain 'B':
Compound: superoxide dismutase
Species: Anaplasma phagocytophilum [TaxId:212042]
Gene: sodB, APH_0371
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3js4b1, d3js4b2 - Chain 'C':
Compound: superoxide dismutase
Species: Anaplasma phagocytophilum [TaxId:212042]
Gene: sodB, APH_0371
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3js4c1, d3js4c2 - Chain 'D':
Compound: superoxide dismutase
Species: Anaplasma phagocytophilum [TaxId:212042]
Gene: sodB, APH_0371
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3js4d1, d3js4d2 - Heterogens: FE, NA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3js4A (A:)
mahhhhhhmgtleaqtqgpgsmfelsdlpyeglepyisshlldrhynghhktyvdvlnkl
vvgtefeglgneslgdivvkahnsgsagraifnnaaqiwnhdfywqsmkpngggnppekl
remiehsfgsvegfnnafttsglgqfgsgwvwlvydedakalkvvstanadsplltqgql
platmdvwehayyldylnlrkkyidvflehllnwdfvlgrledagvl
Sequence, based on observed residues (ATOM records): (download)
>3js4A (A:)
smfelsdlpyeglepyisshlldrhynghhktyvdvlnklvvgtefeglgneslgdivvk
ahnsgsagraifnnaaqiwnhdfywqsmkpngggnppeklremiehsfgsvegfnnaftt
sglgqfgsgwvwlvydedakalkvvstanadsplltqgqlplatmdvwehayyldylnlr
kkyidvflehllnwdfvlgrledagvl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3js4B (B:)
mahhhhhhmgtleaqtqgpgsmfelsdlpyeglepyisshlldrhynghhktyvdvlnkl
vvgtefeglgneslgdivvkahnsgsagraifnnaaqiwnhdfywqsmkpngggnppekl
remiehsfgsvegfnnafttsglgqfgsgwvwlvydedakalkvvstanadsplltqgql
platmdvwehayyldylnlrkkyidvflehllnwdfvlgrledagvl
Sequence, based on observed residues (ATOM records): (download)
>3js4B (B:)
smfelsdlpyeglepyisshlldrhynghhktyvdvlnklvvgtefeglgneslgdivvk
ahnsgsagraifnnaaqiwnhdfywqsmkpngggnppeklremiehsfgsvegfnnaftt
sglgqfgsgwvwlvydedakalkvvstanadsplltqgqlplatmdvwehayyldylnlr
kkyidvflehllnwdfvlgrledagvl
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3js4C (C:)
mahhhhhhmgtleaqtqgpgsmfelsdlpyeglepyisshlldrhynghhktyvdvlnkl
vvgtefeglgneslgdivvkahnsgsagraifnnaaqiwnhdfywqsmkpngggnppekl
remiehsfgsvegfnnafttsglgqfgsgwvwlvydedakalkvvstanadsplltqgql
platmdvwehayyldylnlrkkyidvflehllnwdfvlgrledagvl
Sequence, based on observed residues (ATOM records): (download)
>3js4C (C:)
mfelsdlpyeglepyisshlldrhynghhktyvdvlnklvvgtefeglgneslgdivvka
hnsgsagraifnnaaqiwnhdfywqsmkpngggnppeklremiehsfgsvegfnnaftts
glgqfgsgwvwlvydedakalkvvstanadsplltqgqlplatmdvwehayyldylnlrk
kyidvflehllnwdfvlgrledagvl
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3js4D (D:)
mahhhhhhmgtleaqtqgpgsmfelsdlpyeglepyisshlldrhynghhktyvdvlnkl
vvgtefeglgneslgdivvkahnsgsagraifnnaaqiwnhdfywqsmkpngggnppekl
remiehsfgsvegfnnafttsglgqfgsgwvwlvydedakalkvvstanadsplltqgql
platmdvwehayyldylnlrkkyidvflehllnwdfvlgrledagvl
Sequence, based on observed residues (ATOM records): (download)
>3js4D (D:)
mfelsdlpyeglepyisshlldrhynghhktyvdvlnklvvgtefeglgneslgdivvka
hnsgsagraifnnaaqiwnhdfywqsmkpngggnppeklremiehsfgsvegfnnaftts
glgqfgsgwvwlvydedakalkvvstanadsplltqgqlplatmdvwehayyldylnlrk
kyidvflehllnwdfvlgrledagvl