PDB entry 3in1

View 3in1 on RCSB PDB site
Description: Crystal structure of a putative Ribokinase in complex with ADP from E.coli
Class: transferase
Keywords: RIBOKINASE, TRANSFERASE, PFKB FAMILY, SUGAR KINASE YDJH, ADP NYSGXRC, 11206A, PSI2, Kinase, Structural Genomics, Protein Structure Initiative, New York SGX Research Center for Structural Genomics
Deposited on 2009-08-11, released 2009-09-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uncharacterized sugar kinase ydjH
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b1772, JW5289, ydjH, ydjH/B1772/JW5289
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3in1a_
  • Chain 'B':
    Compound: Uncharacterized sugar kinase ydjH
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b1772, JW5289, ydjH, ydjH/B1772/JW5289
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3in1b_
  • Heterogens: ADP, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3in1A (A:)
msldnldvicigaaivdiplqpvsknifdvdsypleriamttggdaineatiisrlghrt
almsrigkdaagqfildhcrkenidiqslkqdvsidtsinvglvtedgertfvtnrngsl
wklniddvdfarfsqakllslasifnsplldgkalteiftqakarqmiicadmikprlne
tlddicealsyvdylfpnfaeaklltgketldeiadcflacgvktvviktgkdgcfikrg
dmtmkvpavagitaidtigagdnfasgfiaallegknlrecarfanataaisvlsvgatt
gvknrklveqlleeyegeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3in1A (A:)
nldvicigaaivdiplqpvsknifdvdsypleriamttggdaineatiisrlghrtalms
rigkdaagqfildhcrkenidiqslkqdvsidtsinvglvtedgertfvtnrngslwkln
iddvdfarfsqakllslasifnsplldgkalteiftqakarqmiicadmikprlnetldd
icealsyvdylfpnfaeaklltgketldeiadcflacgvktvviktgkdgcfikrgdmtm
kvpavagitaidtigagdnfasgfiaallegknlrecarfanataaisvlsvgattgvkn
rklveqlleeye

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3in1B (B:)
msldnldvicigaaivdiplqpvsknifdvdsypleriamttggdaineatiisrlghrt
almsrigkdaagqfildhcrkenidiqslkqdvsidtsinvglvtedgertfvtnrngsl
wklniddvdfarfsqakllslasifnsplldgkalteiftqakarqmiicadmikprlne
tlddicealsyvdylfpnfaeaklltgketldeiadcflacgvktvviktgkdgcfikrg
dmtmkvpavagitaidtigagdnfasgfiaallegknlrecarfanataaisvlsvgatt
gvknrklveqlleeyegeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3in1B (B:)
nldvicigaaivdiplqpvsknifdvdsypleriamttggdaineatiisrlghrtalms
rigkdaagqfildhcrkenidiqslkqdvsidtsinvglvtedgertfvtnrngslwkln
iddvdfarfsqakllslasifnsplldgkalteiftqakarqmiicadmikprlnetldd
icealsyvdylfpnfaeaklltgketldeiadcflacgvktvviktgkdgcfikrgdmtm
kvpavagitaidtigagdnfasgfiaallegknlrecarfanataaisvlsvgattgvkn
rklveqlleeye