SCOPe 2.06: Structural Classification of Proteins

PDB entry 3ifg

View 3ifg on RCSB PDB site
Description: Crystal structure of succinate-semialdehyde dehydrogenase from Burkholderia pseudomallei, part 1 of 2
Class: oxidoreductase
Keywords: NIAID,.Infectious Disease, SSGCID, Seattle Structural Genomics Center for Infectious Disease, Non-crystallographic symmetry, NCS, Oxidoreductase
Deposited on 2009-07-24, released 2009-08-04
The last revision prior to the SCOPe 2.06 freeze date was dated 2014-12-10, with a file datestamp of 2014-12-05.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.238
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifga1, d3ifga2
Chain 'B':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgb1, d3ifgb2
Chain 'C':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgc1, d3ifgc2
Chain 'D':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgd1, d3ifgd2
Chain 'E':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifge1, d3ifge2
Chain 'F':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgf1, d3ifgf2
Chain 'G':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgg1, d3ifgg2
Chain 'H':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgh1, d3ifgh2
Chain 'I':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgi1, d3ifgi2
Chain 'J':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgj1, d3ifgj2
Chain 'K':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgk1, d3ifgk2
Chain 'L':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgl1, d3ifgl2
Chain 'M':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgm1, d3ifgm2
Chain 'N':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgn1, d3ifgn2
Chain 'O':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgo1, d3ifgo2
Chain 'P':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.06: d3ifgp1, d3ifgp2
Heterogens: HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>3ifgA (A:)
gpgsmkdpsllrhqayiggewqaadsdatfevfdpatgeslgtvpkmgaaetaraieaaq
aawagwrmktakeraailrrwfdlviansddlaliltteqgkplaeakgeiayaasfiew
faeegkrvagdtlptpdankrivvvkepigvcaaitpwnfpaamiarkvgpalaagcpiv
vkpaestpfsalamaflaeragvpkgvlsvvigdpkaigteitsnpivrklsftgstavg
rllmaqsaptvkkltlelggnapfivfddadldaavegaiaskyrnngqtcvctnrffvh
ervydafadklaaavsklkvgrgtesgatlgplineaavkkveshiadalakgaslmtgg
krhalghgffeptvltgvkpdmdvakeetfgplaplfrfaseeelvrlandtefglaayl
ysrdigrvwrvaealeygmvgintglisnevapfggvkqsglgregshygiddyvvikyl
cvav