PDB entry 3hjn

View 3hjn on RCSB PDB site
Description: Crystal structure of thymidylate kinase in complex with dTDP and ADP from Thermotoga maritima
Class: transferase
Keywords: thymidylate kinase, ATP-binding, Kinase, Nucleotide biosynthesis, Nucleotide-binding, Transferase, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI
Deposited on 2009-05-22, released 2009-06-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.226
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: thymidylate kinase
    Species: THERMOTOGA MARITIMA [TaxId:243274]
    Gene: tmk, TM_1099
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3hjna_
  • Chain 'B':
    Compound: thymidylate kinase
    Species: THERMOTOGA MARITIMA [TaxId:243274]
    Gene: tmk, TM_1099
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3hjnb_
  • Heterogens: ADP, TYD, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3hjnA (A:)
    mfitfegidgsgkstqiqllaqylekrgkkvilkrepggtetgekirkilleeevtpkae
    lflflasrnllvteikqylsegyavlldrytdssvayqgfgrnlgkeiveelndfatdgl
    ipdltfyidvdvetalkrkgelnrfekreflervregylvlarehperivvldgkrsiee
    ihrdvvrevkrrwkldv
    

    Sequence, based on observed residues (ATOM records): (download)
    >3hjnA (A:)
    mfitfegidgsgkstqiqllaqylekrgkkvilkrepggtetgekirkilleeevtpkae
    lflflasrnllvteikqylsegyavlldrytdssvayqgfgrnlgkeiveelndfatdgl
    ipdltfyidvdvetalkrknrfekreflervregylvlarehperivvldgkrsieeihr
    dvvrevkrr
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3hjnB (B:)
    mfitfegidgsgkstqiqllaqylekrgkkvilkrepggtetgekirkilleeevtpkae
    lflflasrnllvteikqylsegyavlldrytdssvayqgfgrnlgkeiveelndfatdgl
    ipdltfyidvdvetalkrkgelnrfekreflervregylvlarehperivvldgkrsiee
    ihrdvvrevkrrwkldv
    

    Sequence, based on observed residues (ATOM records): (download)
    >3hjnB (B:)
    mfitfegidgsgkstqiqllaqylekrgkkvilkrepggtetgekirkilleeevtpkae
    lflflasrnllvteikqylsegyavlldrytdssvayqgfgrnlgkeiveelndfatdgl
    ipdltfyidvdvetalkrnrfekreflervregylvlarehperivvldgkrsieeihrd
    vvre