PDB entry 3hi6
View 3hi6 on RCSB PDB site
Description: Crystal structure of intermediate affinity I domain of integrin LFA-1 with the Fab fragment of its antibody AL-57
Class: cell adhesion/immune system
Keywords: integrin, I domain, Fab, ligand mimetic antibody, cell adhesion, Alternative splicing, Calcium, Disulfide bond, Glycoprotein, Magnesium, Membrane, Polymorphism, Receptor, Transmembrane, cell adhesion-immune system COMPLEX
Deposited on
2009-05-19, released
2009-09-22
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-11-01, with a file datestamp of
2017-10-27.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Integrin alpha-L
Species: Homo sapiens [TaxId:9606]
Gene: CD11A, ITGAL, LFA-1
Database cross-references and differences (RAF-indexed):
- Uniprot P20701 (0-179)
- engineered (33)
- variant (61)
- engineered (171)
Domains in SCOPe 2.07: d3hi6a_ - Chain 'B':
Compound: Integrin alpha-L
Species: Homo sapiens [TaxId:9606]
Gene: CD11A, ITGAL, LFA-1
Database cross-references and differences (RAF-indexed):
- Uniprot P20701 (0-179)
- engineered (33)
- variant (61)
- engineered (171)
Domains in SCOPe 2.07: d3hi6b_ - Chain 'H':
Compound: Heavy chain of Fab fragment of AL-57 against alpha L I domain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: light chain of Fab fragment of AL-57 against alpha L I domain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3hi6l1, d3hi6l2 - Chain 'X':
Compound: Heavy chain of Fab fragment of AL-57 against alpha L I domain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'Y':
Compound: light chain of Fab fragment of AL-57 against alpha L I domain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3hi6y1, d3hi6y2 - Heterogens: MN, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3hi6A (A:)
gnvdlvflfdgsmslqpdefqkildfmkdvmkkcsntsyqfaavqfstsyktefdfsdyv
kwkdpdallkhvkhmllltntfgainyvatevfreelgarpdatkvliiitdgeatdsgn
idaakdiiryiigigkhfqtkesqetlhkfaskpasefvkildtfeklkdlctelqkkiy
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3hi6B (B:)
gnvdlvflfdgsmslqpdefqkildfmkdvmkkcsntsyqfaavqfstsyktefdfsdyv
kwkdpdallkhvkhmllltntfgainyvatevfreelgarpdatkvliiitdgeatdsgn
idaakdiiryiigigkhfqtkesqetlhkfaskpasefvkildtfeklkdlctelqkkiy
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>3hi6L (L:)
qdiqmtqspsslsasvgdrvtitcrasqsigsylnwyqqktgkapkaliyaasslqsgvp
srfsgsgsgtdftltisslqledfatyycqqsystpsfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrg
Sequence, based on observed residues (ATOM records): (download)
>3hi6L (L:)
iqmtqspsslsasvgdrvtitcrasqsigsylnwyqqktgkapkaliyaasslqsgvpsr
fsgsgsgtdftltisslqledfatyycqqsystpsfgqgtkveikrtvaapsvfifppsd
eqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltls
kadyekhkvyacevthqglsspvtksfnrg
- Chain 'X':
No sequence available.
- Chain 'Y':
Sequence, based on SEQRES records: (download)
>3hi6Y (Y:)
qdiqmtqspsslsasvgdrvtitcrasqsigsylnwyqqktgkapkaliyaasslqsgvp
srfsgsgsgtdftltisslqledfatyycqqsystpsfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrg
Sequence, based on observed residues (ATOM records): (download)
>3hi6Y (Y:)
iqmtqspsslsasvgdrvtitcrasqsigsylnwyqqktgkapkaliyaasslqsgvpsr
fsgsgsgtdftltisslqledfatyycqqsystpsfgqgtkveikrtvaapsvfifppsd
eqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltls
kadyekhkvyacevthqglsspvtksfnr