PDB entry 3hi1
View 3hi1 on RCSB PDB site
Description: Structure of HIV-1 gp120 (core with V3) in Complex with CD4-Binding-Site Antibody F105
Class: STRUCTURAL PROTEIN/Immune System
Keywords: HIV, GP120, CD4 BINDING SITE ANTIBODY, F105, IMMUNE EVASION, AIDS, Apoptosis, Cell membrane, Cleavage on pair of basic residues, Disulfide bond, Envelope protein, Fusion protein, Glycoprotein, Host-virus interaction, Lipoprotein, Membrane, Palmitate, Transmembrane, Viral immunoevasion, Virion, STRUCTURAL PROTEIN-Immune System COMPLEX
Deposited on
2009-05-18, released
2009-11-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: f105 light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3hi1a1, d3hi1a2 - Chain 'B':
Compound: f105 heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: Glycoprotein 120
Species: Human immunodeficiency virus type 1 [TaxId:362651]
Gene: ENV
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3hi1g_ - Chain 'H':
Compound: f105 heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'J':
Compound: Glycoprotein 120
Species: Human immunodeficiency virus type 1 [TaxId:362651]
Gene: ENV
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3hi1j_ - Chain 'L':
Compound: f105 light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3hi1l1, d3hi1l2 - Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3hi1A (A:)
eivltqspgtlslsageratlscrasqsvssrylawyqqkpgqaprlliygassratgip
drfsgsgsgtdftltisrvepedfavyycqqydnsvctfgqgtkleikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec
- Chain 'B':
No sequence available.
- Chain 'G':
Sequence, based on SEQRES records: (download)
>3hi1G (G:)
tenfnmwknnmveqmhediislwdqslkpcvkltggsvitqacpkvsfepipihycapag
failkcndkkfngtgpctnvstvqcthgirpvvstqlllngslaeeeivirsenftnnak
tiivqlnesvvinctrpnnntrksinigpgralyttgeiigdirqahcnlsktqwentle
qiaiklkeqfgnnktiifnpssggdpeivthsfncggeffycnstqlftwndtrklnntg
rnitlpcrikqiinmwqevgkamyappirgqircssnitgllltrdggkdtngteifrpg
ggdmrdnwrselykykvvkie
Sequence, based on observed residues (ATOM records): (download)
>3hi1G (G:)
tenfnmwknnmveqmhediislwdqslkpcvkltggsvitqacpkvsfepipihycapag
failkcndkkfngtgpctnvstvqcthgirpvvstqlllngslaeeeivirsenftnnak
tiivqlnesvvinctrpnnrqahcnlsktqwentleqiaiklkeqfgnnktiifnpssgg
dpeivthsfncggeffycnstqlftwndrnitlpcrikqiinmwqevgkamyappirgqi
rcssnitgllltrdggkdtngteifrpgggdmrdnwrselykykvvkie
- Chain 'H':
No sequence available.
- Chain 'J':
Sequence, based on SEQRES records: (download)
>3hi1J (J:)
tenfnmwknnmveqmhediislwdqslkpcvkltggsvitqacpkvsfepipihycapag
failkcndkkfngtgpctnvstvqcthgirpvvstqlllngslaeeeivirsenftnnak
tiivqlnesvvinctrpnnntrksinigpgralyttgeiigdirqahcnlsktqwentle
qiaiklkeqfgnnktiifnpssggdpeivthsfncggeffycnstqlftwndtrklnntg
rnitlpcrikqiinmwqevgkamyappirgqircssnitgllltrdggkdtngteifrpg
ggdmrdnwrselykykvvkie
Sequence, based on observed residues (ATOM records): (download)
>3hi1J (J:)
tenfnmwknnmveqmhediislwdqslkpcvkltggsvitqacpkvsfepipihycapag
failkcndkkfngtgpctnvstvqcthgirpvvstqlllngslaeeeivirsenftnnak
tiivqlnesvvinctrpnnrqahcnlsktqwentleqiaiklkeqfgnnktiifnpssgg
dpeivthsfncggeffycnstqlftwndrnitlpcrikqiinmwqevgkamyappirgqi
rcssnitgllltrdggkdtngteifrpgggdmrdnwrselykykvvkie
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>3hi1L (L:)
eivltqspgtlslsageratlscrasqsvssrylawyqqkpgqaprlliygassratgip
drfsgsgsgtdftltisrvepedfavyycqqydnsvctfgqgtkleikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec