PDB entry 3hdu

View 3hdu on RCSB PDB site
Description: crystal structure of a putative thioesterase (syn_01977) from syntrophus aciditrophicus sb at 2.50 a resolution
Class: hydrolase
Keywords: putative thioesterase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, hydrolase
Deposited on 2009-05-07, released 2009-06-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative thioesterase
    Species: Syntrophus aciditrophicus SB [TaxId:56780]
    Gene: SYNAS_18640, SYN_01977, YP_461911.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3hdua_
  • Chain 'B':
    Compound: Putative thioesterase
    Species: Syntrophus aciditrophicus SB [TaxId:56780]
    Gene: SYNAS_18640, SYN_01977, YP_461911.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3hdub_
  • Chain 'C':
    Compound: Putative thioesterase
    Species: Syntrophus aciditrophicus SB [TaxId:56780]
    Gene: SYNAS_18640, SYN_01977, YP_461911.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3hduc_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3hduA (A:)
gmpnfskneevlfsavneifeekipfnkiiglkvrfispeqvklsfemrdelignairrm
lyggvissaidmtaglaafmgfqekmsgkpmeeklamigrlstmslhveylrpglgrefv
ctgynvrtgnkvavirtelmndqdeliavgsvsyilv

    Sequence, based on observed residues (ATOM records): (download) 
    >3hduA (A:)
skneevlfsavneifeekipfnkiiglkvrfispeqvklsfemrdelignairrmlyggv
issaidmtaglaafmgfqekmsgkpmeeklamigrlstmslhveylrpglgrefvctgyn
vrtgnkvavirtelmndqdeliavgsvsyilv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3hduB (B:)
gmpnfskneevlfsavneifeekipfnkiiglkvrfispeqvklsfemrdelignairrm
lyggvissaidmtaglaafmgfqekmsgkpmeeklamigrlstmslhveylrpglgrefv
ctgynvrtgnkvavirtelmndqdeliavgsvsyilv

    Sequence, based on observed residues (ATOM records): (download) 
    >3hduB (B:)
evlfsavneifeekipfnkiiglkvrfispeqvklsfemrdelignairrmlyggvissa
idmtaglaafmgfqekmsgkpmeeklamigrlstmslhveylrpglgrefvctgynvrtg
nkvavirtelmndqdeliavgsvsyilv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3hduC (C:)
gmpnfskneevlfsavneifeekipfnkiiglkvrfispeqvklsfemrdelignairrm
lyggvissaidmtaglaafmgfqekmsgkpmeeklamigrlstmslhveylrpglgrefv
ctgynvrtgnkvavirtelmndqdeliavgsvsyilv

    Sequence, based on observed residues (ATOM records): (download) 
    >3hduC (C:)
kneevlfsavneifeekipfnkiiglkvrfispeqvklsfemrdelignairrmlyggvi
ssaidmtaglaafmgfqekmsgkpmeeklamigrlstmslhveylrpglgrefvctgynv
rtgnkvavirtelmndqdeliavgsvsyilv