PDB entry 3had

View 3had on RCSB PDB site
Description: biochemical characterization and structure determination of human heart short chain l-3-hydroxyacyl coa dehydrogenase provide insight into catalytic mechanism
Class: oxidoreductase
Keywords: oxidoreductase, beta oxidation, schad, catalytic activity: l-3-hydroxyacyl-coa + nad(+) = 3-oxoacyl-coa + nadh
Deposited on 1998-12-03, released 2000-01-12
The last revision prior to the SCOP 1.73 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.218
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (l-3-hydroxyacyl coa dehydrogenase)
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q16836 (Start-301)
      • new isozyme (124)
      • new isozyme (139)
      • his tag (302-303)
    Domains in SCOP 1.73: d3hada1, d3hada2
  • Chain 'B':
    Compound: protein (l-3-hydroxyacyl coa dehydrogenase)
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q16836 (Start-301)
      • new isozyme (124)
      • new isozyme (139)
    Domains in SCOP 1.73: d3hadb1, d3hadb2
  • Heterogens: NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3hadA (A:)
sssstasasakkiivkhvtviggglmgagiaqvaaatghtvvlvdqtedilakskkgiee
slrkvakkkfaenpkagdefvektlstiatstdaasvvhstdlvveaivenlkvknelfk
rldkraaehtifasntsslqitsianattrqdrfaglhffnpvpvmklveviktpmtsqk
tfeslvdfskalgkhpvsckdtpgfivnrllvpylmeairlyergdaskedidtamklga
gypmgpfelldyvgldttkfivdgwhemdaenplhqpspslnklvaenkfgkktgegfyk
ykhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3hadA (A:)
kiivkhvtviggglmgagiaqvaaatghtvvlvdqtedilakskkgieeslrkvakkkfa
enpkagdefvektlstiatstdaasvvhstdlvveaivenlkvknelfkrldkraaehti
fasntsslqitsianattrqdrfaglhffnpvpvmklveviktpmtsqktfeslvdfska
lgkhpvsckdtpgfivnrllvpylmeairlyergdaskedidtamklgagypmgpfelld
yvgldttkfivdgwhemdaenplhqpspslnklvaenkfgkktgegfykykhh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3hadB (B:)
sssstasasakkiivkhvtviggglmgagiaqvaaatghtvvlvdqtedilakskkgiee
slrkvakkkfaenpkagdefvektlstiatstdaasvvhstdlvveaivenlkvknelfk
rldkraaehtifasntsslqitsianattrqdrfaglhffnpvpvmklveviktpmtsqk
tfeslvdfskalgkhpvsckdtpgfivnrllvpylmeairlyergdaskedidtamklga
gypmgpfelldyvgldttkfivdgwhemdaenplhqpspslnklvaenkfgkktgegfyk
ykhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3hadB (B:)
kiivkhvtviggglmgagiaqvaaatghtvvlvdqtedilakskkgieeslrkvakkkfa
enpkagdefvektlstiatstdaasvvhstdlvveaivenlkvknelfkrldkraaehti
fasntsslqitsianattrqdrfaglhffnpvpvmklveviktpmtsqktfeslvdfska
lgkhpvsckdtpgfivnrllvpylmeairlyergdaskedidtamklgagypmgpfelld
yvgldttkfivdgwhemdaenplhqpspslnklvaenkfgkktgegfykyk