PDB entry 3h9y

View 3h9y on RCSB PDB site
Description: Crystal structure of the IgE-Fc3-4 domains
Class: immune system
Keywords: Immunoglobin, IgE, Fc, flexibility, hydrophobic pocket, Disulfide bond, Glycoprotein, Immunoglobulin C region, Immunoglobulin domain, IMMUNE SYSTEM
Deposited on 2009-04-30, released 2009-09-08
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.23 Å
R-factor: 0.233
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ig epsilon chain c region
    Species: Homo sapiens [TaxId:9606]
    Gene: IGHE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01854
      • engineered (46)
      • engineered (58)
    Domains in SCOPe 2.04: d3h9ya1, d3h9ya2
  • Chain 'B':
    Compound: ig epsilon chain c region
    Species: Homo sapiens [TaxId:9606]
    Gene: IGHE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01854
      • engineered (46)
      • engineered (58)
    Domains in SCOPe 2.04: d3h9yb1, d3h9yb2
  • Chain 'E':
    Compound: ig epsilon chain c region
    Species: Homo sapiens [TaxId:9606]
    Gene: IGHE
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01854
      • engineered (46)
      • engineered (58)
    Domains in SCOPe 2.04: d3h9ye1, d3h9ye2
  • Heterogens: NH4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3h9yA (A:)
adpcadsnprgvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqh
strkeekqrngtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraape
vyafatpewpgsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgff
vfsrlevtraeweqkdeficravheaaspsqtvqravsvnpgk

    Sequence, based on observed residues (ATOM records): (download) 
    >3h9yA (A:)
vsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqhstrkeekqrng
tltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraapevyafatpewpg
srdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgffvfsrlevtrae
weqkdeficravheaaspsqtvqravsvn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3h9yB (B:)
adpcadsnprgvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqh
strkeekqrngtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraape
vyafatpewpgsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgff
vfsrlevtraeweqkdeficravheaaspsqtvqravsvnpgk

    Sequence, based on observed residues (ATOM records): (download) 
    >3h9yB (B:)
gvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqhstrkeekqrn
gtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraapevyafatpewp
gsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgffvfsrlevtra
eweqkdeficravheaaspsqtvqravsvn

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3h9yE (E:)
adpcadsnprgvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqh
strkeekqrngtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraape
vyafatpewpgsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgff
vfsrlevtraeweqkdeficravheaaspsqtvqravsvnpgk

    Sequence, based on observed residues (ATOM records): (download) 
    >3h9yE (E:)
vsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqhstrkeekqrng
tltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraapevyafatpewpg
srdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgffvfsrlevtrae
weqkdeficravheaaspsqtvqravsvn