PDB entry 3h9s

View 3h9s on RCSB PDB site
Description: The complex between TCR A6 and human Class I MHC HLA-A2 with the bound Tel1p peptide
Class: immune system
Keywords: Tel1p peptide, nonapeptide, MHC class I, HLA-A2, TCR A6, cross-reactivity, Disulfide bond, Glycoprotein, Host-virus interaction, Immune response, Membrane, MHC I, Phosphoprotein, Transmembrane, Disease mutation, Glycation, Immunoglobulin domain, Pyrrolidone carboxylic acid, Secreted, IMMUNE SYSTEM
Deposited on 2009-04-30, released 2010-01-12
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.221
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: HLA class I histocompatibility antigen, A-2 alpha chain
  Species: Homo sapiens [TaxId:9606]
  Gene: HLA-A, HLAA
  Database cross-references and differences (RAF-indexed):
  • Uniprot P01892 (0-274)
• Chain 'B':
  Compound: Beta-2-microglobulin
  Species: Homo sapiens [TaxId:9606]
  Gene: B2M, CDABP0092, HDCMA22P
  Database cross-references and differences (RAF-indexed):
  • Uniprot P61769 (1-99)
    • insertion (0)
  Domains in SCOPe 2.05: d3h9sb_
• Chain 'C':
  Compound: Tel1p peptide
  Species: synthetic, synthetic
  Database cross-references and differences (RAF-indexed):
  • PDB 3H9S (0-8)
• Chain 'D':
  Compound: A6 TCR alpha chain
  Species: Homo sapiens [TaxId:9606]
  Database cross-references and differences (RAF-indexed):
  • PDB 3H9S (0-199)
• Chain 'E':
  Compound: TRBV6-5 protein
  Species: Homo sapiens [TaxId:9606]
  Gene: TRBV6-5
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q2YDB4 (0-244)
    • insertion (96-97)
    • conflict (98)
    • conflict (100-102)
    • conflict (112-113)
    • conflict (189)
    • conflict (203)
• Heterogens: GOL, HOH

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >3h9sB (B:)
  miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
  wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
  

  
  
• Chain 'C':
  No sequence available.
  
  
• Chain 'D':
  No sequence available.
  
  
• Chain 'E':
  No sequence available.