PDB entry 3h86

View 3h86 on RCSB PDB site
Description: Crystal structure of adenylate kinase from Methanococcus maripaludis
Class: transferase
Keywords: mesophile, kinase, adenylate kinase, phosphotransferase, ATP-binding, Cytoplasm, Nucleotide-binding, Transferase
Deposited on 2009-04-28, released 2009-10-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: adenylate kinase
    Species: Methanococcus maripaludis [TaxId:39152]
    Gene: adk, adkA, MMP1031
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6LYG0 (Start-191)
      • variant (60)
    Domains in SCOPe 2.08: d3h86a_
  • Chain 'B':
    Compound: adenylate kinase
    Species: Methanococcus maripaludis [TaxId:39152]
    Gene: adk, adkA, MMP1031
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6LYG0 (Start-191)
      • variant (60)
    Domains in SCOPe 2.08: d3h86b_
  • Chain 'C':
    Compound: adenylate kinase
    Species: Methanococcus maripaludis [TaxId:39152]
    Gene: adk, adkA, MMP1031
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6LYG0 (Start-191)
      • variant (60)
    Domains in SCOPe 2.08: d3h86c_
  • Chain 'G':
    Compound: adenylate kinase
    Species: Methanococcus maripaludis [TaxId:39152]
    Gene: adk, adkA, MMP1031
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6LYG0 (Start-191)
      • variant (60)
    Domains in SCOPe 2.08: d3h86g_
  • Heterogens: AP5, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3h86A (A:)
mknkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmr
kldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdiviv
vetdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglv
dnaveelmsvlr

    Sequence, based on observed residues (ATOM records): (download) 
    >3h86A (A:)
knkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmrk
ldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdivivv
etdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglvd
naveelmsvlr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3h86B (B:)
mknkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmr
kldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdiviv
vetdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglv
dnaveelmsvlr

    Sequence, based on observed residues (ATOM records): (download) 
    >3h86B (B:)
knkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmrk
ldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdivivv
etdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglvd
naveelmsvlr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3h86C (C:)
mknkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmr
kldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdiviv
vetdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglv
dnaveelmsvlr

    Sequence, based on observed residues (ATOM records): (download) 
    >3h86C (C:)
knkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmrk
ldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdivivv
etdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglvd
naveelmsvlr

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3h86G (G:)
mknkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmr
kldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdiviv
vetdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglv
dnaveelmsvlr

    Sequence, based on observed residues (ATOM records): (download) 
    >3h86G (G:)
knkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmrk
ldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdivivv
etdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglvd
naveelmsvlr