PDB entry 3h4d

View 3h4d on RCSB PDB site
Description: Ternary complex of human DNA polymerase iota with template U/T and incoming dGTP
Class: replication/DNA
Keywords: DNA polymerase iota, replication, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Nucleus, Schiff base, Transferase, REPLICATION-DNA COMPLEX
Deposited on 2009-04-18, released 2009-07-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-09-08, with a file datestamp of 2010-09-03.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.254
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase iota
    Species: Homo sapiens [TaxId:9606]
    Gene: POLI, RAD30B
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3h4da1, d3h4da2
  • Chain 'P':
    Compound: 5'-d(*ap*gp*gp*ap*cp*cp*(doc))
  • Chain 'T':
    Compound: 5'-d(*tp*(bru)p*gp*gp*gp*tp*cp*cp*t)
  • Heterogens: MG, DGT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3h4dA (A:)
    assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrda
    kekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlq
    sdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkl
    laklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtf
    spkilekelgisvaqriqklsfgednspvilsgppqsfseedsfkkcsseveaknkieel
    lasllnrvcqdgrkphtvrliirryssekhygresrqcpipshviqklgtgnydvmtpmv
    dilmklfrnmvnvkmpfhltllsvcfcnlk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3h4dA (A:)
    assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrda
    kekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlq
    sdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkl
    laklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtf
    spkilekelgisvaqriqklsfgednspvilsgppqsfseedsfkkcsseveaknkieel
    lasllnrvcqdgrkphtvrliirryssekhygresrqcpipshviqvmtpmvdilmklfr
    nmtllsvcfcnlk
    

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.