PDB entry 3h4d
View 3h4d on RCSB PDB site
Description: Ternary complex of human DNA polymerase iota with template U/T and incoming dGTP
Class: replication/DNA
Keywords: DNA polymerase iota, replication, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Nucleus, Schiff base, Transferase, REPLICATION-DNA COMPLEX
Deposited on
2009-04-18, released
2009-07-21
The last revision prior to the SCOPe 2.08 freeze date was dated
2010-09-08, with a file datestamp of
2010-09-03.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.254
AEROSPACI score: 0.33
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase iota
Species: Homo sapiens [TaxId:9606]
Gene: POLI, RAD30B
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3h4da1, d3h4da2 - Chain 'P':
Compound: 5'-d(*ap*gp*gp*ap*cp*cp*(doc))
- Chain 'T':
Compound: 5'-d(*tp*(bru)p*gp*gp*gp*tp*cp*cp*t)
- Heterogens: MG, DGT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3h4dA (A:)
assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrda
kekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlq
sdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkl
laklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtf
spkilekelgisvaqriqklsfgednspvilsgppqsfseedsfkkcsseveaknkieel
lasllnrvcqdgrkphtvrliirryssekhygresrqcpipshviqklgtgnydvmtpmv
dilmklfrnmvnvkmpfhltllsvcfcnlk
Sequence, based on observed residues (ATOM records): (download)
>3h4dA (A:)
assrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrda
kekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlq
sdelsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkl
laklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtf
spkilekelgisvaqriqklsfgednspvilsgppqsfseedsfkkcsseveaknkieel
lasllnrvcqdgrkphtvrliirryssekhygresrqcpipshviqvmtpmvdilmklfr
nmtllsvcfcnlk
- Chain 'P':
No sequence available.
- Chain 'T':
No sequence available.