PDB entry 3gyb

View 3gyb on RCSB PDB site
Description: Crystal structure of a LacI-family transcriptional regulatory protein from Corynebacterium glutamicum
Class: transcription regulator
Keywords: Transcription, Protein Structure Initiative II(PSI II), NYSGXRC, 11232c, Structural Genomics, New York SGX Research Center for Structural Genomics, DNA-binding, Transcription regulation, transcription regulator
Deposited on 2009-04-03, released 2009-04-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transcriptional regulators (LACI-FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN)
    Species: Corynebacterium glutamicum [TaxId:1718]
    Gene: cg0210, Cgl0170
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gyba_
  • Chain 'B':
    Compound: Transcriptional regulators (LACI-FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN)
    Species: Corynebacterium glutamicum [TaxId:1718]
    Gene: cg0210, Cgl0170
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gybb_
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3gybA (A:)
mslrtqliavliddysnpwfidliqslsdvltpkgyrlsvidsltsqagtdpitsalsmr
pdgiiiaqdipdftvpdslppfviagtritqasthdsvanddfrgaeiatkhlidlghth
iahlrvgsgaglrrfesfeatmrahgleplsndylgpavehagytetlallkehpevtai
fssnditaigalgaarelglrvpedlsiigydntplaqtrlinlttiddnsigvgynaal
lllsmldpeaphpeimhtlqpsliergtcapreghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gybA (A:)
rtqliavliddysnpwfidliqslsdvltpkgyrlsvidsltsqagtdpitsalsmrpdg
iiiaqdilppfviagtritqasthdsvanddfrgaeiatkhlidlghthiahlrvgsgag
lrrfesfeatmrahgleplsndylgpavehagytetlallkehpevtaifssnditaiga
lgaarelglrvpedlsiigydntplaqtrlinlttiddnsigvgynaallllsmldpeap
hpeimhtlqpsliergtcapr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3gybB (B:)
mslrtqliavliddysnpwfidliqslsdvltpkgyrlsvidsltsqagtdpitsalsmr
pdgiiiaqdipdftvpdslppfviagtritqasthdsvanddfrgaeiatkhlidlghth
iahlrvgsgaglrrfesfeatmrahgleplsndylgpavehagytetlallkehpevtai
fssnditaigalgaarelglrvpedlsiigydntplaqtrlinlttiddnsigvgynaal
lllsmldpeaphpeimhtlqpsliergtcapreghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gybB (B:)
tqliavliddysnpwfidliqslsdvltpkgyrlsvidsltsqagtdpitsalsmrpdgi
iiaqdipdftvpdslpdsvanddfrgaeiatkhlidlghthiahlrvgsgaglrrfesfe
atmrahgleplsndylgpavehagytetlallkehpevtaifssnditaigalgaarelg
lrvpedlsiigydntplaqtrlinlttiddnsigvgynaallllsmleimhtlqpslier
gtcapr