PDB entry 3gv8
View 3gv8 on RCSB PDB site
Description: Human DNA polymerase iota in complex with T template DNA and incoming dGTP
Class: transferase/DNA
Keywords: Y-family polymerase, polymerase iota, error prone replication, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Nucleus, Schiff base, Transferase, TRANSFERASE-DNA COMPLEX
Deposited on
2009-03-30, released
2009-06-02
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-11-01, with a file datestamp of
2017-10-27.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'B':
Compound: DNA polymerase iota
Species: Homo sapiens [TaxId:9606]
Gene: POLI, RAD30B
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3gv8b1, d3gv8b2 - Chain 'P':
Compound: 5'-d(*ap*gp*gp*ap*cp*cp*c)-3'
- Chain 'T':
Compound: 5'-d(*ap*tp*gp*gp*gp*tp*cp*cp*t)-3'
- Heterogens: MG, DGT, HOH
PDB Chain Sequences:
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3gv8B (B:)
meladvgaaassqgvhdqvlptpnassrvivhvdldcfyaqvemisnpelkdkplgvqqk
ylvvtcnyearklgvkklmnvrdakekcpqlvlvngedltryremsykvtelleefspvv
erlgfdenfvdltemvekrlqqlqsdelsavtvsghvynnqsinlldvlhirllvgsqia
aemreamynqlgltgcagvasnkllaklvsgvfkpnqqtvllpescqhlihslnhikeip
gigyktakclealginsvrdlqtfspkilekelgisvaqriqklsfgednspvilsgppq
sfseedsfkkcsseveaknkieellasllnrvcqdgrkphtvrliirryssekhygresr
qcpipshviqklgtgnydvmtpmvdilmklfrnmvnvkmpfhltllsvcfcnlkalntak
Sequence, based on observed residues (ATOM records): (download)
>3gv8B (B:)
ssrvivhvdldcfyaqvemisnpelkdkplgvqqkylvvtcnyearklgvkklmnvrdak
ekcpqlvlvngedltryremsykvtelleefspvverlgfdenfvdltemvekrlqqlqs
delsavtvsghvynnqsinlldvlhirllvgsqiaaemreamynqlgltgcagvasnkll
aklvsgvfkpnqqtvllpescqhlihslnhikeipgigyktakclealginsvrdlqtfs
pkilekelgisvaqriqklsfgednspvilsgppqsfseedsfkkcsseveaknkieell
asllnrvcrkphtvrliirrygresrqcpipshviqkdvmtpmvdilmklfrnmvnvkmp
fhltllsvcfcnlk
- Chain 'P':
No sequence available.
- Chain 'T':
No sequence available.