PDB entry 3gnj

View 3gnj on RCSB PDB site
Description: The crystal structure of a thioredoxin-related protein from Desulfitobacterium hafniense DCB
Class: structural genomics, unknown function
Keywords: APC92103, thioredoxin, Desulfitobacterium hafniense DCB, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, unknown function
Deposited on 2009-03-17, released 2009-05-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.99 Å
R-factor: 0.199
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thioredoxin domain protein
    Species: Desulfitobacterium hafniense DCB-2 [TaxId:272564]
    Gene: Desulfitobacterium hafniense, Dhaf_4889
    Database cross-references and differences (RAF-indexed):
    • Uniprot B8G0E7 (3-110)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d3gnja1, d3gnja2
  • Chain 'B':
    Compound: Thioredoxin domain protein
    Species: Desulfitobacterium hafniense DCB-2 [TaxId:272564]
    Gene: Desulfitobacterium hafniense, Dhaf_4889
    Database cross-references and differences (RAF-indexed):
    • Uniprot B8G0E7 (3-End)
      • expression tag (2)
    Domains in SCOPe 2.08: d3gnjb1, d3gnjb2
  • Chain 'C':
    Compound: Thioredoxin domain protein
    Species: Desulfitobacterium hafniense DCB-2 [TaxId:272564]
    Gene: Desulfitobacterium hafniense, Dhaf_4889
    Database cross-references and differences (RAF-indexed):
    • Uniprot B8G0E7 (3-110)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d3gnjc1, d3gnjc2
  • Chain 'D':
    Compound: Thioredoxin domain protein
    Species: Desulfitobacterium hafniense DCB-2 [TaxId:272564]
    Gene: Desulfitobacterium hafniense, Dhaf_4889
    Database cross-references and differences (RAF-indexed):
    • Uniprot B8G0E7 (3-110)
      • expression tag (1-2)
    Domains in SCOPe 2.08: d3gnjd1, d3gnjd2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3gnjA (A:)
snamslekldtntfeqliydegkaclvmfsrknchvcqkvtpvleelrlnyeesfgfyyv
dveeektlfqrfslkgvpqilyfkdgeykgkmagdveddeveqmiadvled

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3gnjB (B:)
snamslekldtntfeqliydegkaclvmfsrknchvcqkvtpvleelrlnyeesfgfyyv
dveeektlfqrfslkgvpqilyfkdgeykgkmagdveddeveqmiadvled

    Sequence, based on observed residues (ATOM records): (download) 
    >3gnjB (B:)
amslekldtntfeqliydegkaclvmfsrknchvcqkvtpvleelrlnyeesfgfyyvdv
eeektlfqrfslkgvpqilyfkdgeykgkmagdveddeveqmiadvle

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3gnjC (C:)
snamslekldtntfeqliydegkaclvmfsrknchvcqkvtpvleelrlnyeesfgfyyv
dveeektlfqrfslkgvpqilyfkdgeykgkmagdveddeveqmiadvled

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3gnjD (D:)
snamslekldtntfeqliydegkaclvmfsrknchvcqkvtpvleelrlnyeesfgfyyv
dveeektlfqrfslkgvpqilyfkdgeykgkmagdveddeveqmiadvled

    Sequence, based on observed residues (ATOM records): (download) 
    >3gnjD (D:)
namslekldtntfeqliydegkaclvmfsrknchvcqkvtpvleelrlnyeesfgfyyvd
veeektlfqrfslkgvpqilyfkdgeykgkmagdveddeveqmiadvled