PDB entry 3gj4
View 3gj4 on RCSB PDB site
Description: Crystal structure of human RanGDP-Nup153ZnF3 complex
Class: transport protein
Keywords: G protein, GDP, RAN, Nup153, Nuclear Pore, Zinc Finger, Acetylation, Cytoplasm, GTP-binding, Host-virus interaction, Isopeptide bond, Nucleotide-binding, Nucleus, Phosphoprotein, Polymorphism, Protein transport, Transport, Ubl conjugation, DNA-binding, Metal-binding, mRNA transport, Nuclear pore complex, Translocation, Zinc, Zinc-finger, TRANSPORT PROTEIN
Deposited on
2009-03-07, released
2009-08-04
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-08-04, with a file datestamp of
2009-07-31.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.208
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: GTP-binding nuclear protein ran
Species: Homo sapiens [TaxId:9606]
Gene: RAN, ARA24, OK/SW-cl.81
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3gj4a_ - Chain 'B':
Compound: Nuclear pore complex protein Nup153
Species: Rattus norvegicus [TaxId:10116]
Gene: NUP153
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: GTP-binding nuclear protein ran
Species: Homo sapiens [TaxId:9606]
Gene: RAN, ARA24, OK/SW-cl.81
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3gj4c_ - Chain 'D':
Compound: Nuclear pore complex protein Nup153
Species: Rattus norvegicus [TaxId:10116]
Gene: NUP153
Database cross-references and differences (RAF-indexed):
- Heterogens: MG, GDP, ZN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3gj4A (A:)
gphmasaaqgepqvqfklvlvgdggtgkttfvkrhltgesekkyvatlgvevhplvfhtn
rgpikfnvwdtagqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvceni
pivlcgnkvdikdrkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnle
fvampalappevvmdpalaaqyehdlevaqttalpdedddl
Sequence, based on observed residues (ATOM records): (download)
>3gj4A (A:)
qvqfklvlvgdggtgkttfvkrhltgesekkyvatlgvevhplvfhtnrgpikfnvwdta
gqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlcgnkvdik
drkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvampalappev
vmdpalaaqyehdlevaqtta
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3gj4C (C:)
gphmasaaqgepqvqfklvlvgdggtgkttfvkrhltgesekkyvatlgvevhplvfhtn
rgpikfnvwdtagqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvceni
pivlcgnkvdikdrkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnle
fvampalappevvmdpalaaqyehdlevaqttalpdedddl
Sequence, based on observed residues (ATOM records): (download)
>3gj4C (C:)
qvqfklvlvgdggtgkttfvkrhltgesekkyvatlgvevhplvfhtnrgpikfnvwdta
gqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlcgnkvdik
drkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvampalappev
vmdpalaaqyehdlevaqtt
- Chain 'D':
No sequence available.