PDB entry 3ftf

View 3ftf on RCSB PDB site
Description: Crystal structure of A. aeolicus KsgA in complex with RNA and SAH
Class: transferase/RNA
Keywords: KsgA, Rossmann-like fold, RNA Methyltransferase, MTase, RNA, Antibiotic resistance, Methyltransferase, RNA-binding, rRNA processing, S-adenosyl-L-methionine, Transferase, TRANSFERASE-RNA COMPLEX
Deposited on 2009-01-12, released 2009-03-24
The last revision prior to the SCOPe 2.02 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.241
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dimethyladenosine transferase
    Species: Aquifex aeolicus [TaxId:224324]
    Gene: aq_1816, ksgA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3ftfa_
  • Chain 'C':
    Compound: 5'-r(p*ap*ap*cp*cp*gp*up*ap*gp*gp*gp*gp*ap*ap*cp*cp*up*gp*cp*gp*gp*up*u)-3'
    Species: synthetic, synthetic
  • Chain 'D':
    Compound: 5'-r(p*ap*ap*cp*cp*gp*up*ap*gp*gp*gp*gp*ap*ap*cp*cp*up*gp*cp*gp*gp*up*u)-3'
    Species: synthetic, synthetic
  • Heterogens: SAH, K, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3ftfA (A:)
    smvrlkksfgqhllvsegvlkkiaeelnieegntvvevgggtgnltkvllqhplkklyvi
    eldremvenlksigderlevinedaskfpfcslgkelkvvgnlpynvasliientvynkd
    cvplavfmvqkevaeklqgkkdtgwlsvfvrtfydvnyvmtvpprffvpppkvqsavikl
    vknekfpvkdlknykkfltkifqnrrkvlrkkipeellkeaginpdarveqlsledffkl
    yrliedsge
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ftfA (A:)
    mvrlkksfgqhllvsegvlkkiaeelnieegntvvevgggtgnltkvllqhplkklyvie
    ldremvenlksigderlevinedaskfpfcslgkelkvvgnlpynvasliientvynkdc
    vplavfmvqkevaeklqgkkdtgwlsvfvrtfydvnyvmtvpprffvpppkvqsaviklv
    knekfpvkdlknykkfltkifqnrrkvlrkkipeellkeaginpdarveqlsledffkly
    rlieds
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.