PDB entry 3fmg
View 3fmg on RCSB PDB site
Description: Structure of rotavirus outer capsid protein VP7 trimer in complex with a neutralizing Fab
Class: immune system
Keywords: antibody-antigen complex, calcium dependent trimer, antiparallel beta-sandwich, jelly roll, alpha-beta-alpha sandwich, Rossmann fold, Capsid protein, Endoplasmic reticulum, Glycoprotein, Membrane, Transmembrane, Virion, IMMUNE SYSTEM
Deposited on
2008-12-22, released
2009-06-23
The last revision prior to the SCOPe 2.07 freeze date was dated
2010-06-02, with a file datestamp of
2010-05-28.
Experiment type: XRAY
Resolution: 3.4 Å
R-factor: 0.224
AEROSPACI score: 0.17
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Glycoprotein VP7
Species: Simian rotavirus [TaxId:10922]
Gene: S9, VP7
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: Fab of neutralizing antibody 4F8, heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Fab of neutralizing antibody 4F8, light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3fmgl1, d3fmgl2 - Heterogens: CA