PDB entry 3equ

View 3equ on RCSB PDB site
Description: Crystal structure of penicillin-binding protein 2 from Neisseria gonorrhoeae
Class: biosynthetic protein
Keywords: Penicillin-binding protein, Class B transpeptidase, Cell division, Cell inner membrane, Cell membrane, Cell shape, Cell wall biogenesis/degradation, Peptidoglycan synthesis, BIOSYNTHETIC PROTEIN
Deposited on 2008-10-01, released 2008-10-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.211
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Penicillin-binding protein 2
    Species: Neisseria gonorrhoeae [TaxId:485]
    Gene: penA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3equa1, d3equa2
  • Chain 'B':
    Compound: Penicillin-binding protein 2
    Species: Neisseria gonorrhoeae [TaxId:485]
    Gene: penA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3equb1, d3equb2
  • Heterogens: SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3equA (A:)
gsggarglylqtvtynflkeqgdnrivrtqalpatrgtvsdrngavlalsapteslfavp
kdmkempsaaqlerlselvdvpvdvlrnkleqkgksfiwikrqldpkvaeevkalglenf
vfekelkrhypmgnlfahvigftdidgkgqeglelsledslygedgaevvlrdrqgnivd
sldsprnkapqngkdiilsldqriqtlayeelnkaveyhqakagtvvvldartgeilala
ntpaydpnrpgradseqrrnravtdmiepgsaikpfviakaldagktdlnerlntqpyki
gpspvrdthvypsldvrgimqkssnvgtsklsarfgaeemydfyhelgigvrmhsgfpge
tagllrnwrrwrpieqatmsfgyglqlsllqlaraytalthdgvllplsfekqavapqgk
rifkestarevrnlmvsvtepggtgtagavdgfdvgaktgtarkfvngryadnkhvatfi
gfapaknprvivavtideptahgyyggvvagppfkkimggslnilgisptkpltaaavkt
ps

    Sequence, based on observed residues (ATOM records): (download) 
    >3equA (A:)
nrivrtqalpatrgtvsdrngavlalsaptelkrhypmgnlfahvigftdidgkgqegle
lsledslygedgaevvlrdrqgnivdsldsprnkapqngkdiilsldqriqtlayeelnk
aveyhqakagtvvvldartgeilalantpaydpnrpgradseqrrnravtdmiepgsaik
pfviakaldagktdlnerlntqpykigpspvrdthvypsldvrgimqkssnvgtsklsar
fgaeemydfyhelgigvrmhsgfpgetagllrnwrrwrpieqatmsfgyglqlsllqlar
aytalthdgvllplsfekqavapqgkrifkestarevrnlmvsvtepggtgtagavdgfd
vgaktgtakhvatfigfapaknprvivavtideptahgyyggvvagppfkkimggslnil
gisptkplt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3equB (B:)
gsggarglylqtvtynflkeqgdnrivrtqalpatrgtvsdrngavlalsapteslfavp
kdmkempsaaqlerlselvdvpvdvlrnkleqkgksfiwikrqldpkvaeevkalglenf
vfekelkrhypmgnlfahvigftdidgkgqeglelsledslygedgaevvlrdrqgnivd
sldsprnkapqngkdiilsldqriqtlayeelnkaveyhqakagtvvvldartgeilala
ntpaydpnrpgradseqrrnravtdmiepgsaikpfviakaldagktdlnerlntqpyki
gpspvrdthvypsldvrgimqkssnvgtsklsarfgaeemydfyhelgigvrmhsgfpge
tagllrnwrrwrpieqatmsfgyglqlsllqlaraytalthdgvllplsfekqavapqgk
rifkestarevrnlmvsvtepggtgtagavdgfdvgaktgtarkfvngryadnkhvatfi
gfapaknprvivavtideptahgyyggvvagppfkkimggslnilgisptkpltaaavkt
ps

    Sequence, based on observed residues (ATOM records): (download) 
    >3equB (B:)
ivrtqalpatrgtvsdrngavlalsapelkrhypmgnlfahvigftdidgkgqeglelsl
edslygedgaevvlrdnivdsldsprnkapqngkdiilsldqriqtlayeelnkaveyhq
akagtvvvldartgeilalantpaydpnrpgradseqrrnravtdmiepgsaikpfviak
aldagktdlnerlntqpykigpspvrdthvypsldvrgimqkssnvgtsklsarfgaeem
ydfyhelgigvrmhsgfpgetagllrnwrrwrpieqatmsfgyglqlsllqlaraytalt
hdgvllplsfekqavapqgkrifkestarevrnlmvsvtepggtgtagavdgfdvgaktg
tarknkhvatfigfapaknprvivavtideptahgyyggvvagppfkkimggslnilgis
ptkplt